Protein–RNA interactions for Protein: Q8N0V3

RBFA, Putative ribosome-binding factor A, mitochondrial, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFAQ8N0V3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 AC108751.1-201ENST00000490852 363 ntBASIC17.2■□□□□ 0.34
RBFAQ8N0V3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 AL139424.1-201ENST00000607572 797 ntBASIC17.2■□□□□ 0.34
RBFAQ8N0V3 AC004706.3-202ENST00000621574 984 ntBASIC17.2■□□□□ 0.34
RBFAQ8N0V3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 AC093525.9-201ENST00000624961 1746 ntBASIC17.2■□□□□ 0.34
RBFAQ8N0V3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RBFAQ8N0V3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 RNA5SP416-201ENST00000516838 111 ntBASIC17.18■□□□□ 0.34
RBFAQ8N0V3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RBFAQ8N0V3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFAQ8N0V3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RBFAQ8N0V3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFAQ8N0V3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms