Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 LINC01451-201ENST00000623792 534 ntBASIC17.47■□□□□ 0.39
CHPFQ8IZ52 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHPFQ8IZ52 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 HMGN1P19-201ENST00000436976 333 ntBASIC17.46■□□□□ 0.39
CHPFQ8IZ52 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 AL031432.2-201ENST00000566714 459 ntBASIC17.46■□□□□ 0.39
CHPFQ8IZ52 AL928711.1-201ENST00000570165 459 ntBASIC17.46■□□□□ 0.39
CHPFQ8IZ52 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHPFQ8IZ52 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHPFQ8IZ52 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHPFQ8IZ52 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHPFQ8IZ52 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.46■□□□□ 0.38
CHPFQ8IZ52 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHPFQ8IZ52 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 ACTG1P14-201ENST00000446382 1122 ntBASIC17.44■□□□□ 0.38
CHPFQ8IZ52 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 AC091812.2-201ENST00000619081 385 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms