Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 AC004945.1-201ENST00000416738 983 ntBASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 AC004790.1-201ENST00000612686 536 ntBASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 HMGA1P7-201ENST00000406908 502 ntBASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 AC087163.2-201ENST00000457299 853 ntBASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 IGHV3-52-201ENST00000519770 353 ntBASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 MIR4453-201ENST00000584019 89 ntBASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13BQ7Z7G8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 PP12613-201ENST00000424958 2230 ntBASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 SNX29P1-201ENST00000548357 1007 ntBASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 AC106886.1-201ENST00000568660 600 ntBASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 AP3S2-216ENST00000617003 1561 ntBASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13BQ7Z7G8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 AC004233.3-201ENST00000607794 1269 ntBASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 AL139099.5-201ENST00000635274 300 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms