Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SMARCD3Q6STE5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMARCD3Q6STE5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
SMARCD3Q6STE5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SMARCD3Q6STE5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 AC008894.3-201ENST00000624324 3103 ntBASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 FLJ16779-201ENST00000612722 7638 ntBASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 AC211429.1-201ENST00000415277 523 ntBASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 AC104076.2-201ENST00000448912 469 ntBASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 LINC01238-205ENST00000567549 1107 ntBASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 AL138831.2-201ENST00000606564 490 ntBASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 AL049757.1-201ENST00000616842 1596 ntBASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 AC046158.3-201ENST00000624947 2558 ntBASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMARCD3Q6STE5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 FAM220CP-201ENST00000395253 831 ntBASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 AC022616.7-201ENST00000525383 220 ntBASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 AC011840.4-201ENST00000578471 627 ntBASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 AC090616.6-201ENST00000582640 721 ntBASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMARCD3Q6STE5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SMARCD3Q6STE5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms