Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 UNC93B7-201ENST00000509439 705 ntBASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 AL157888.1-201ENST00000631930 593 ntBASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 LINC00304-203ENST00000565008 1864 ntBASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXR1Q6PIV2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 AP000867.3-201ENST00000524675 377 ntBASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 MIR3180-1-201ENST00000580374 94 ntBASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 MIR3180-3-201ENST00000584616 94 ntBASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXR1Q6PIV2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms