Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.05■□□□□ -0
C11orf88Q6PI97 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.05■□□□□ -0
C11orf88Q6PI97 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.05■□□□□ -0
C11orf88Q6PI97 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.05■□□□□ -0
C11orf88Q6PI97 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.05■□□□□ -0
C11orf88Q6PI97 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
C11orf88Q6PI97 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
C11orf88Q6PI97 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.05■□□□□ -0
C11orf88Q6PI97 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.05■□□□□ -0
C11orf88Q6PI97 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.05■□□□□ -0
C11orf88Q6PI97 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.05■□□□□ -0
C11orf88Q6PI97 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
C11orf88Q6PI97 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.04■□□□□ -0
C11orf88Q6PI97 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.04■□□□□ -0
C11orf88Q6PI97 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.04■□□□□ -0
C11orf88Q6PI97 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
C11orf88Q6PI97 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.04■□□□□ -0
C11orf88Q6PI97 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.04■□□□□ -0
C11orf88Q6PI97 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.04■□□□□ -0
C11orf88Q6PI97 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
C11orf88Q6PI97 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.04■□□□□ -0
C11orf88Q6PI97 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
C11orf88Q6PI97 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.04■□□□□ -0
C11orf88Q6PI97 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.04■□□□□ -0
C11orf88Q6PI97 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
C11orf88Q6PI97 MCCD1P1-208ENST00000445732 328 ntBASIC15.04■□□□□ -0
C11orf88Q6PI97 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.04■□□□□ -0
C11orf88Q6PI97 AP003041.3-201ENST00000527151 707 ntBASIC15.04■□□□□ -0
C11orf88Q6PI97 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.04■□□□□ -0
C11orf88Q6PI97 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.04■□□□□ -0
C11orf88Q6PI97 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.04■□□□□ -0
C11orf88Q6PI97 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
C11orf88Q6PI97 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
C11orf88Q6PI97 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
C11orf88Q6PI97 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.04■□□□□ -0
C11orf88Q6PI97 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.04■□□□□ -0
C11orf88Q6PI97 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
C11orf88Q6PI97 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.03■□□□□ -0
C11orf88Q6PI97 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.03■□□□□ -0
C11orf88Q6PI97 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.03■□□□□ -0
C11orf88Q6PI97 AC099343.3-201ENST00000605834 2503 ntBASIC15.03■□□□□ -0
C11orf88Q6PI97 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
C11orf88Q6PI97 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.03■□□□□ -0
C11orf88Q6PI97 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.03■□□□□ -0
C11orf88Q6PI97 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
C11orf88Q6PI97 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
C11orf88Q6PI97 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.03■□□□□ -0
C11orf88Q6PI97 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.03■□□□□ -0
C11orf88Q6PI97 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.03■□□□□ -0
C11orf88Q6PI97 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.03■□□□□ -0
C11orf88Q6PI97 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.03■□□□□ -0
C11orf88Q6PI97 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.03■□□□□ -0
C11orf88Q6PI97 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
C11orf88Q6PI97 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.03■□□□□ -0
C11orf88Q6PI97 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
C11orf88Q6PI97 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
C11orf88Q6PI97 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
C11orf88Q6PI97 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
C11orf88Q6PI97 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.03■□□□□ -0
C11orf88Q6PI97 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
C11orf88Q6PI97 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms