Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPRIN2Q6IMN6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPRIN2Q6IMN6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.5■□□□□ 0.39
CAPRIN2Q6IMN6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 AC104819.1-201ENST00000504587 486 ntBASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CAPRIN2Q6IMN6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 FLJ13224-201ENST00000313737 1514 ntBASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 NSUN5P1-202ENST00000421140 1535 ntBASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 NSUN5P2-203ENST00000457352 1529 ntBASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 PCDHA14-201ENST00000506751 2298 ntBASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPRIN2Q6IMN6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPRIN2Q6IMN6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPRIN2Q6IMN6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPRIN2Q6IMN6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPRIN2Q6IMN6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPRIN2Q6IMN6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPRIN2Q6IMN6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPRIN2Q6IMN6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPRIN2Q6IMN6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms