Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LYSMD4-203ENST00000378904 2122 ntBASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 AC090164.3-201ENST00000610780 2143 ntBASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 AC241585.1-201ENST00000433527 519 ntBASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 CRB3P1-201ENST00000449338 276 ntBASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD4Q5XG99 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 AC093503.3-201ENST00000624917 2352 ntBASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 RNU1-129P-201ENST00000384064 167 ntBASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 AC092580.3-201ENST00000430932 139 ntBASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 AP005018.1-201ENST00000525475 301 ntBASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 U1.21-201ENST00000580816 167 ntBASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LYSMD4Q5XG99 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LYSMD4Q5XG99 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
LYSMD4Q5XG99 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 LINC00304-203ENST00000565008 1864 ntBASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 MIR4453-201ENST00000584019 89 ntBASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD4Q5XG99 AL138781.2-201ENST00000617896 1843 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms