Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC063926.2-201ENST00000623766 1308 ntBASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 PP14571-201ENST00000404327 934 ntTSL 2 BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 AC027369.6-201ENST00000525520 931 ntBASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 AC016396.2-201ENST00000562575 1417 ntBASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 SPTLC1P1-201ENST00000447199 261 ntBASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 COMP-202ENST00000425807 2292 ntTSL 2 BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDC42BPAQ5VT25 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 AL132655.2-201ENST00000596276 594 ntBASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 AC018529.1-201ENST00000613063 361 ntBASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC25.58■■□□□ 1.69
CDC42BPAQ5VT25 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.68
CDC42BPAQ5VT25 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.68
CDC42BPAQ5VT25 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CDC42BPAQ5VT25 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CDC42BPAQ5VT25 HNRNPA3P1-201ENST00000401429 1139 ntBASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 HNRNPA3P5-201ENST00000455201 833 ntBASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 AC008738.7-201ENST00000609744 511 ntBASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 AC021097.1-201ENST00000607902 574 ntBASIC25.57■■□□□ 1.68
CDC42BPAQ5VT25 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 AC108860.2-201ENST00000562760 2183 ntBASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 AC087289.5-201ENST00000586076 3175 ntBASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 AL021920.2-201ENST00000624828 1351 ntBASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDC42BPAQ5VT25 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.55■■□□□ 1.68
CDC42BPAQ5VT25 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDC42BPAQ5VT25 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC25.55■■□□□ 1.68
CDC42BPAQ5VT25 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC25.55■■□□□ 1.68
CDC42BPAQ5VT25 HLA-H-201ENST00000383620 1096 ntBASIC25.55■■□□□ 1.68
CDC42BPAQ5VT25 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC25.55■■□□□ 1.68
CDC42BPAQ5VT25 GPER1-207ENST00000619052 571 ntTSL 2 BASIC25.55■■□□□ 1.68
CDC42BPAQ5VT25 BOC-212ENST00000485230 2173 ntTSL 2 BASIC25.55■■□□□ 1.68
CDC42BPAQ5VT25 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDC42BPAQ5VT25 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CDC42BPAQ5VT25 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms