Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 RN7SL219P-201ENST00000582872 296 ntBASIC14.7□□□□□ -0.06
LRRK2Q5S007 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 CETN4P-206ENST00000642099 2168 ntBASIC14.7□□□□□ -0.06
LRRK2Q5S007 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 AC055876.2-201ENST00000531834 546 ntBASIC14.69□□□□□ -0.06
LRRK2Q5S007 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 BANF1P1-201ENST00000553684 263 ntBASIC14.69□□□□□ -0.06
LRRK2Q5S007 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.69□□□□□ -0.06
LRRK2Q5S007 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRK2Q5S007 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LRRK2Q5S007 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRK2Q5S007 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRK2Q5S007 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRK2Q5S007 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRK2Q5S007 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRK2Q5S007 BRWD1P1-201ENST00000401091 371 ntBASIC14.68□□□□□ -0.06
LRRK2Q5S007 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRK2Q5S007 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRK2Q5S007 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRK2Q5S007 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 FO681548.1-201ENST00000455617 1132 ntBASIC14.68□□□□□ -0.06
LRRK2Q5S007 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRK2Q5S007 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRK2Q5S007 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LRRK2Q5S007 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 HLA-H-201ENST00000383620 1096 ntBASIC14.67□□□□□ -0.06
LRRK2Q5S007 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 MIR1908-201ENST00000410394 80 ntBASIC14.67□□□□□ -0.06
LRRK2Q5S007 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 CALR4P-201ENST00000431943 946 ntBASIC14.67□□□□□ -0.06
LRRK2Q5S007 CTBP2P5-201ENST00000454986 1264 ntBASIC14.67□□□□□ -0.06
LRRK2Q5S007 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 LINC00896-202ENST00000609602 2128 ntBASIC14.67□□□□□ -0.06
LRRK2Q5S007 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms