Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 POM121L3P-201ENST00000419331 1163 ntBASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 IGHV3-47-201ENST00000425060 335 ntBASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 AC111152.3-201ENST00000569699 673 ntBASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 AL162727.3-201ENST00000635661 2787 ntBASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 NSUN5P1-202ENST00000421140 1535 ntBASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 NSUN5P2-203ENST00000457352 1529 ntBASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF3Q3KNV8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 DUTP2-201ENST00000519164 463 ntBASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 AC091304.2-201ENST00000564639 760 ntBASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 AC099336.1-202ENST00000602961 463 ntBASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF3Q3KNV8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCGF3Q3KNV8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms