Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
HLA-BQ31612 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-BQ31612 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.54■□□□□ 0.24
HLA-BQ31612 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.54■□□□□ 0.24
HLA-BQ31612 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 GK-202ENST00000378941 458 ntTSL 3 BASIC16.54■□□□□ 0.24
HLA-BQ31612 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HLA-BQ31612 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-BQ31612 HCG4-201ENST00000418983 998 ntBASIC16.54■□□□□ 0.24
HLA-BQ31612 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.54■□□□□ 0.24
HLA-BQ31612 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.54■□□□□ 0.24
HLA-BQ31612 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.54■□□□□ 0.24
HLA-BQ31612 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-BQ31612 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 AC027307.2-201ENST00000591252 911 ntBASIC16.54■□□□□ 0.24
HLA-BQ31612 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HLA-BQ31612 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-BQ31612 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-BQ31612 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HLA-BQ31612 AC104581.1-202ENST00000635932 2618 ntBASIC16.53■□□□□ 0.24
HLA-BQ31612 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HLA-BQ31612 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-BQ31612 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HLA-BQ31612 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HLA-BQ31612 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HLA-BQ31612 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.53■□□□□ 0.24
HLA-BQ31612 GAPDHP21-201ENST00000450301 1010 ntBASIC16.53■□□□□ 0.24
HLA-BQ31612 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-BQ31612 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-BQ31612 AP000842.3-202ENST00000569238 1080 ntBASIC16.53■□□□□ 0.24
HLA-BQ31612 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HLA-BQ31612 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
HLA-BQ31612 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.53■□□□□ 0.24
HLA-BQ31612 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HLA-BQ31612 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-BQ31612 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-BQ31612 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-BQ31612 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-BQ31612 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-BQ31612 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
HLA-BQ31612 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-BQ31612 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-BQ31612 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-BQ31612 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-BQ31612 MIR346-201ENST00000362234 95 ntBASIC16.52■□□□□ 0.24
HLA-BQ31612 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-BQ31612 RNU1-129P-201ENST00000384064 167 ntBASIC16.52■□□□□ 0.24
HLA-BQ31612 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.52■□□□□ 0.24
HLA-BQ31612 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HLA-BQ31612 U1.21-201ENST00000580816 167 ntBASIC16.52■□□□□ 0.24
HLA-BQ31612 AL031055.1-201ENST00000606362 631 ntBASIC16.52■□□□□ 0.24
HLA-BQ31612 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HLA-BQ31612 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.52■□□□□ 0.23
HLA-BQ31612 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-BQ31612 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-BQ31612 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-BQ31612 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HLA-BQ31612 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-BQ31612 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HLA-BQ31612 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-BQ31612 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-BQ31612 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms