Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HIST1H3AP68431 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15□□□□□ -0.01
HIST1H3AP68431 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15□□□□□ -0.01
HIST1H3AP68431 AGGF1P2-201ENST00000426656 2106 ntBASIC15□□□□□ -0.01
HIST1H3AP68431 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15□□□□□ -0.01
HIST1H3AP68431 FGFR3P6-201ENST00000457012 610 ntBASIC15□□□□□ -0.01
HIST1H3AP68431 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15□□□□□ -0.01
HIST1H3AP68431 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H3AP68431 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HIST1H3AP68431 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15□□□□□ -0.01
HIST1H3AP68431 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HIST1H3AP68431 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 NCF1C-201ENST00000438382 1427 ntBASIC15□□□□□ -0.01
HIST1H3AP68431 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 AC011676.5-201ENST00000624864 2660 ntBASIC15□□□□□ -0.01
HIST1H3AP68431 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 AC064862.7-201ENST00000604520 867 ntBASIC14.99□□□□□ -0.01
HIST1H3AP68431 AL589182.2-201ENST00000619332 1049 ntBASIC14.99□□□□□ -0.01
HIST1H3AP68431 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H3AP68431 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HIST1H3AP68431 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.98□□□□□ -0.01
HIST1H3AP68431 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HIST1H3AP68431 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.98□□□□□ -0.01
HIST1H3AP68431 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.98□□□□□ -0.01
HIST1H3AP68431 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HIST1H3AP68431 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.98□□□□□ -0.01
HIST1H3AP68431 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 AKR1C7P-201ENST00000305623 895 ntBASIC14.98□□□□□ -0.01
HIST1H3AP68431 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H3AP68431 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HIST1H3AP68431 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.98□□□□□ -0.01
HIST1H3AP68431 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.98□□□□□ -0.01
HIST1H3AP68431 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.98□□□□□ -0.01
HIST1H3AP68431 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms