Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.88□□□□□ -0.03
UBA52P62987 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.88□□□□□ -0.03
UBA52P62987 AC104819.1-201ENST00000504587 486 ntBASIC14.88□□□□□ -0.03
UBA52P62987 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.88□□□□□ -0.03
UBA52P62987 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.88□□□□□ -0.03
UBA52P62987 AL160237.2-201ENST00000556165 472 ntBASIC14.88□□□□□ -0.03
UBA52P62987 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.88□□□□□ -0.03
UBA52P62987 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.88□□□□□ -0.03
UBA52P62987 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.88□□□□□ -0.03
UBA52P62987 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 KRT8P7-201ENST00000533003 1432 ntBASIC14.88□□□□□ -0.03
UBA52P62987 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
UBA52P62987 AL355312.1-201ENST00000407115 2176 ntBASIC14.88□□□□□ -0.03
UBA52P62987 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.88□□□□□ -0.03
UBA52P62987 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.88□□□□□ -0.03
UBA52P62987 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 Z83836.1-201ENST00000624605 1642 ntBASIC14.88□□□□□ -0.03
UBA52P62987 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.88□□□□□ -0.03
UBA52P62987 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.88□□□□□ -0.03
UBA52P62987 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.87□□□□□ -0.03
UBA52P62987 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.87□□□□□ -0.03
UBA52P62987 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
UBA52P62987 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.87□□□□□ -0.03
UBA52P62987 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.87□□□□□ -0.03
UBA52P62987 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 KRT18P31-201ENST00000506277 1292 ntBASIC14.87□□□□□ -0.03
UBA52P62987 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.87□□□□□ -0.03
UBA52P62987 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 AC104692.2-201ENST00000603054 253 ntBASIC14.87□□□□□ -0.03
UBA52P62987 AC010240.3-201ENST00000607688 395 ntBASIC14.87□□□□□ -0.03
UBA52P62987 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.87□□□□□ -0.03
UBA52P62987 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.87□□□□□ -0.03
UBA52P62987 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.87□□□□□ -0.03
UBA52P62987 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
UBA52P62987 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UBA52P62987 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 AC022188.1-201ENST00000620960 1664 ntBASIC14.87□□□□□ -0.03
UBA52P62987 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBA52P62987 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
UBA52P62987 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
UBA52P62987 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
UBA52P62987 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
UBA52P62987 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.86□□□□□ -0.03
UBA52P62987 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.86□□□□□ -0.03
UBA52P62987 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
UBA52P62987 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.86□□□□□ -0.03
UBA52P62987 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
UBA52P62987 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms