Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.94■□□□□ 0.3
SRP54P61011 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
SRP54P61011 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.94■□□□□ 0.3
SRP54P61011 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SRP54P61011 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.94■□□□□ 0.3
SRP54P61011 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 AC133963.1-201ENST00000504166 1679 ntBASIC16.94■□□□□ 0.3
SRP54P61011 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.94■□□□□ 0.3
SRP54P61011 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SRP54P61011 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SRP54P61011 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.93■□□□□ 0.3
SRP54P61011 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.93■□□□□ 0.3
SRP54P61011 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.93■□□□□ 0.3
SRP54P61011 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.93■□□□□ 0.3
SRP54P61011 AC096734.2-201ENST00000562054 433 ntBASIC16.93■□□□□ 0.3
SRP54P61011 AC010507.1-201ENST00000633895 436 ntBASIC16.93■□□□□ 0.3
SRP54P61011 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SRP54P61011 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SRP54P61011 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.93■□□□□ 0.3
SRP54P61011 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
SRP54P61011 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.93■□□□□ 0.3
SRP54P61011 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.93■□□□□ 0.3
SRP54P61011 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.93■□□□□ 0.3
SRP54P61011 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP54P61011 AC011270.2-201ENST00000624293 2550 ntBASIC16.92■□□□□ 0.3
SRP54P61011 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.92■□□□□ 0.3
SRP54P61011 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.92■□□□□ 0.3
SRP54P61011 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.92■□□□□ 0.3
SRP54P61011 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.92■□□□□ 0.3
SRP54P61011 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.92■□□□□ 0.3
SRP54P61011 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.92■□□□□ 0.3
SRP54P61011 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.92■□□□□ 0.3
SRP54P61011 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.92■□□□□ 0.3
SRP54P61011 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.92■□□□□ 0.3
SRP54P61011 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.92■□□□□ 0.3
SRP54P61011 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.92■□□□□ 0.3
SRP54P61011 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.92■□□□□ 0.3
SRP54P61011 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.92■□□□□ 0.3
SRP54P61011 AL513190.1-201ENST00000621254 727 ntBASIC16.92■□□□□ 0.3
SRP54P61011 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SRP54P61011 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SRP54P61011 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.92■□□□□ 0.3
SRP54P61011 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SRP54P61011 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP54P61011 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SRP54P61011 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.91■□□□□ 0.3
SRP54P61011 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.91■□□□□ 0.3
SRP54P61011 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SRP54P61011 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.91■□□□□ 0.3
SRP54P61011 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms