Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN12P56749 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN12P56749 AC010460.3-201ENST00000511359 1579 ntBASIC14.98□□□□□ -0.01
CLDN12P56749 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN12P56749 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN12P56749 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN12P56749 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN12P56749 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN12P56749 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLDN12P56749 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
CLDN12P56749 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLDN12P56749 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLDN12P56749 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN12P56749 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN12P56749 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN12P56749 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN12P56749 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLDN12P56749 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN12P56749 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN12P56749 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN12P56749 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN12P56749 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN12P56749 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN12P56749 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLDN12P56749 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN12P56749 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN12P56749 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CLDN12P56749 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN12P56749 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN12P56749 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN12P56749 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CLDN12P56749 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN12P56749 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN12P56749 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN12P56749 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN12P56749 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN12P56749 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 AC096633.1-201ENST00000422446 749 ntBASIC14.96□□□□□ -0.01
CLDN12P56749 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CLDN12P56749 AL513523.2-202ENST00000427283 2040 ntBASIC14.96□□□□□ -0.01
CLDN12P56749 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 TSPY15P-201ENST00000457163 923 ntBASIC14.96□□□□□ -0.01
CLDN12P56749 RASA4DP-201ENST00000460726 1199 ntBASIC14.96□□□□□ -0.01
CLDN12P56749 AC008550.1-201ENST00000511500 884 ntBASIC14.96□□□□□ -0.01
CLDN12P56749 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN12P56749 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN12P56749 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN12P56749 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN12P56749 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN12P56749 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN12P56749 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.96□□□□□ -0.02
CLDN12P56749 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.96□□□□□ -0.02
CLDN12P56749 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN12P56749 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN12P56749 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN12P56749 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CLDN12P56749 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.96□□□□□ -0.02
CLDN12P56749 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN12P56749 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.96□□□□□ -0.02
CLDN12P56749 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN12P56749 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms