Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN6P56747 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN6P56747 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CLDN6P56747 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
CLDN6P56747 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN6P56747 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN6P56747 TERF1P3-201ENST00000505638 1227 ntBASIC16.44■□□□□ 0.22
CLDN6P56747 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN6P56747 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN6P56747 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN6P56747 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN6P56747 AL135744.1-201ENST00000565098 629 ntBASIC16.44■□□□□ 0.22
CLDN6P56747 AC015911.4-201ENST00000588022 1070 ntBASIC16.44■□□□□ 0.22
CLDN6P56747 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLDN6P56747 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN6P56747 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
CLDN6P56747 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 AC046185.3-201ENST00000623228 1824 ntBASIC16.43■□□□□ 0.22
CLDN6P56747 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN6P56747 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN6P56747 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.43■□□□□ 0.22
CLDN6P56747 KLF2P3-201ENST00000451977 1087 ntBASIC16.43■□□□□ 0.22
CLDN6P56747 AC125807.1-201ENST00000483097 614 ntBASIC16.43■□□□□ 0.22
CLDN6P56747 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN6P56747 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN6P56747 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN6P56747 IGHV3-42-201ENST00000520410 361 ntBASIC16.43■□□□□ 0.22
CLDN6P56747 AC087641.1-201ENST00000557561 1021 ntBASIC16.43■□□□□ 0.22
CLDN6P56747 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN6P56747 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.43■□□□□ 0.22
CLDN6P56747 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN6P56747 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN6P56747 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN6P56747 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN6P56747 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN6P56747 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDN6P56747 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDN6P56747 BICD1-207ENST00000551848 1962 ntBASIC16.42■□□□□ 0.22
CLDN6P56747 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN6P56747 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLDN6P56747 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN6P56747 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 MYCLP1-201ENST00000372451 1075 ntBASIC16.42■□□□□ 0.22
CLDN6P56747 GK-202ENST00000378941 458 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDN6P56747 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN6P56747 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms