Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.77■□□□□ 0.12
CDH11P55287 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 AC009154.2-201ENST00000621177 724 ntBASIC15.77■□□□□ 0.12
CDH11P55287 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH11P55287 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH11P55287 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.77■□□□□ 0.11
CDH11P55287 AC046185.3-201ENST00000623228 1824 ntBASIC15.77■□□□□ 0.11
CDH11P55287 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.77■□□□□ 0.11
CDH11P55287 LINC02012-201ENST00000608206 1725 ntBASIC15.77■□□□□ 0.11
CDH11P55287 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDH11P55287 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.77■□□□□ 0.11
CDH11P55287 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH11P55287 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH11P55287 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH11P55287 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CDH11P55287 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CDH11P55287 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CDH11P55287 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CDH11P55287 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH11P55287 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CDH11P55287 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH11P55287 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
CDH11P55287 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 AC104819.1-201ENST00000504587 486 ntBASIC15.76■□□□□ 0.11
CDH11P55287 AC112698.1-201ENST00000510299 916 ntBASIC15.76■□□□□ 0.11
CDH11P55287 GUSBP12-201ENST00000513727 720 ntBASIC15.76■□□□□ 0.11
CDH11P55287 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.76■□□□□ 0.11
CDH11P55287 AL592071.1-201ENST00000611956 408 ntBASIC15.76■□□□□ 0.11
CDH11P55287 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH11P55287 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH11P55287 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH11P55287 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDH11P55287 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH11P55287 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH11P55287 VENTXP7-201ENST00000475503 772 ntBASIC15.75■□□□□ 0.11
CDH11P55287 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.75■□□□□ 0.11
CDH11P55287 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH11P55287 AC012615.1-201ENST00000565797 1299 ntBASIC15.75■□□□□ 0.11
CDH11P55287 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH11P55287 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH11P55287 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH11P55287 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH11P55287 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDH11P55287 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH11P55287 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH11P55287 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDH11P55287 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH11P55287 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CDH11P55287 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH11P55287 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms