Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 AL022342.1-201ENST00000400363 863 ntBASIC18.73■□□□□ 0.59
NCKAP1LP55160 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1LP55160 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.73■□□□□ 0.59
NCKAP1LP55160 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 ZNF259P1-201ENST00000407656 1365 ntBASIC18.72■□□□□ 0.59
NCKAP1LP55160 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 IGLL3P-201ENST00000412472 434 ntBASIC18.72■□□□□ 0.59
NCKAP1LP55160 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 AP000347.1-202ENST00000435868 847 ntBASIC18.72■□□□□ 0.59
NCKAP1LP55160 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 VN2R19P-201ENST00000442399 1052 ntBASIC18.72■□□□□ 0.59
NCKAP1LP55160 HCG4B-203ENST00000450128 991 ntBASIC18.72■□□□□ 0.59
NCKAP1LP55160 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 BCL2-203ENST00000589955 5011 ntBASIC18.72■□□□□ 0.59
NCKAP1LP55160 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1LP55160 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1LP55160 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 CRYGEP-201ENST00000412192 528 ntBASIC18.71■□□□□ 0.59
NCKAP1LP55160 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.71■□□□□ 0.59
NCKAP1LP55160 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1LP55160 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms