Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NR1H2P55055 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR1H2P55055 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NR1H2P55055 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NR1H2P55055 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NR1H2P55055 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NR1H2P55055 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.32■□□□□ 0.2
NR1H2P55055 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.32■□□□□ 0.2
NR1H2P55055 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 MCCD1P1-208ENST00000445732 328 ntBASIC16.32■□□□□ 0.2
NR1H2P55055 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.32■□□□□ 0.2
NR1H2P55055 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.32■□□□□ 0.2
NR1H2P55055 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.32■□□□□ 0.2
NR1H2P55055 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NR1H2P55055 ZNF444P1-201ENST00000559497 298 ntBASIC16.32■□□□□ 0.2
NR1H2P55055 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 AC005332.1-201ENST00000577698 1310 ntBASIC16.32■□□□□ 0.2
NR1H2P55055 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NR1H2P55055 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.32■□□□□ 0.2
NR1H2P55055 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NR1H2P55055 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H2P55055 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.32■□□□□ 0.2
NR1H2P55055 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NR1H2P55055 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 GPAT2P1-201ENST00000444924 1672 ntBASIC16.31■□□□□ 0.2
NR1H2P55055 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NR1H2P55055 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 LINC01311-201ENST00000565162 1445 ntBASIC16.31■□□□□ 0.2
NR1H2P55055 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H2P55055 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.31■□□□□ 0.2
NR1H2P55055 KRT18P38-201ENST00000449496 1282 ntBASIC16.31■□□□□ 0.2
NR1H2P55055 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.31■□□□□ 0.2
NR1H2P55055 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.31■□□□□ 0.2
NR1H2P55055 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.31■□□□□ 0.2
NR1H2P55055 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.31■□□□□ 0.2
NR1H2P55055 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.31■□□□□ 0.2
NR1H2P55055 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.31■□□□□ 0.2
NR1H2P55055 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
NR1H2P55055 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
NR1H2P55055 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H2P55055 LINC01451-201ENST00000623792 534 ntBASIC16.31■□□□□ 0.2
NR1H2P55055 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H2P55055 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NR1H2P55055 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NR1H2P55055 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H2P55055 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NR1H2P55055 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H2P55055 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NR1H2P55055 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.31■□□□□ 0.2
NR1H2P55055 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.31■□□□□ 0.2
NR1H2P55055 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.3■□□□□ 0.2
NR1H2P55055 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.3■□□□□ 0.2
NR1H2P55055 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.3■□□□□ 0.2
NR1H2P55055 AC016396.2-201ENST00000562575 1417 ntBASIC16.3■□□□□ 0.2
NR1H2P55055 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms