Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN5P54829 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN5P54829 NCF1C-201ENST00000438382 1427 ntBASIC17.72■□□□□ 0.43
PTPN5P54829 TUBB3P1-201ENST00000405796 1332 ntBASIC17.72■□□□□ 0.43
PTPN5P54829 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN5P54829 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PTPN5P54829 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN5P54829 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN5P54829 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN5P54829 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN5P54829 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN5P54829 AC009949.1-201ENST00000623048 1830 ntBASIC17.71■□□□□ 0.43
PTPN5P54829 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN5P54829 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN5P54829 COX5BP8-201ENST00000416911 349 ntBASIC17.71■□□□□ 0.43
PTPN5P54829 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN5P54829 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
PTPN5P54829 KLF2P3-201ENST00000451977 1087 ntBASIC17.71■□□□□ 0.43
PTPN5P54829 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN5P54829 AL512638.1-201ENST00000457493 794 ntBASIC17.71■□□□□ 0.43
PTPN5P54829 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.71■□□□□ 0.43
PTPN5P54829 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN5P54829 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.71■□□□□ 0.43
PTPN5P54829 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.71■□□□□ 0.43
PTPN5P54829 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN5P54829 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PTPN5P54829 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN5P54829 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN5P54829 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PTPN5P54829 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PTPN5P54829 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN5P54829 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN5P54829 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPN5P54829 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPN5P54829 AC107890.1-201ENST00000422478 521 ntBASIC17.7■□□□□ 0.42
PTPN5P54829 AC007967.3-201ENST00000434308 558 ntBASIC17.7■□□□□ 0.42
PTPN5P54829 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPN5P54829 GPR53P-205ENST00000457298 1084 ntBASIC17.7■□□□□ 0.42
PTPN5P54829 RN7SL692P-201ENST00000464677 288 ntBASIC17.7■□□□□ 0.42
PTPN5P54829 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.7■□□□□ 0.42
PTPN5P54829 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN5P54829 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPN5P54829 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPN5P54829 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN5P54829 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN5P54829 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN5P54829 AD001527.2-201ENST00000622994 785 ntBASIC17.7■□□□□ 0.42
PTPN5P54829 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN5P54829 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN5P54829 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN5P54829 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PTPN5P54829 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN5P54829 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN5P54829 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PTPN5P54829 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
PTPN5P54829 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.69■□□□□ 0.42
PTPN5P54829 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 AC122714.2-201ENST00000502787 707 ntBASIC17.69■□□□□ 0.42
PTPN5P54829 IGHV3-71-201ENST00000523324 359 ntBASIC17.69■□□□□ 0.42
PTPN5P54829 SLC25A39P2-201ENST00000537614 270 ntBASIC17.69■□□□□ 0.42
PTPN5P54829 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.69■□□□□ 0.42
PTPN5P54829 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PTPN5P54829 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTPN5P54829 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN5P54829 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN5P54829 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PTPN5P54829 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN5P54829 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PTPN5P54829 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN5P54829 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN5P54829 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms