Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD23BP54727 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.35■□□□□ 0.53
RAD23BP54727 AL049840.3-201ENST00000602669 611 ntBASIC18.35■□□□□ 0.53
RAD23BP54727 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.35■□□□□ 0.53
RAD23BP54727 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
RAD23BP54727 AL773604.1-201ENST00000617417 272 ntBASIC18.35■□□□□ 0.53
RAD23BP54727 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.35■□□□□ 0.53
RAD23BP54727 AC008735.5-201ENST00000623544 497 ntBASIC18.35■□□□□ 0.53
RAD23BP54727 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.35■□□□□ 0.53
RAD23BP54727 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD23BP54727 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAD23BP54727 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD23BP54727 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.35■□□□□ 0.53
RAD23BP54727 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RAD23BP54727 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.34■□□□□ 0.53
RAD23BP54727 AC006504.4-201ENST00000592118 1568 ntBASIC18.34■□□□□ 0.53
RAD23BP54727 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.34■□□□□ 0.53
RAD23BP54727 AL031284.1-201ENST00000419297 478 ntBASIC18.34■□□□□ 0.53
RAD23BP54727 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.34■□□□□ 0.53
RAD23BP54727 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
RAD23BP54727 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.34■□□□□ 0.53
RAD23BP54727 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.34■□□□□ 0.53
RAD23BP54727 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.34■□□□□ 0.53
RAD23BP54727 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAD23BP54727 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAD23BP54727 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAD23BP54727 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RAD23BP54727 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
RAD23BP54727 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD23BP54727 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RAD23BP54727 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAD23BP54727 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAD23BP54727 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.33■□□□□ 0.53
RAD23BP54727 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAD23BP54727 HLA-A-201ENST00000376802 1334 ntBASIC18.33■□□□□ 0.53
RAD23BP54727 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
RAD23BP54727 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAD23BP54727 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.33■□□□□ 0.52
RAD23BP54727 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.33■□□□□ 0.52
RAD23BP54727 AC073621.1-201ENST00000392730 636 ntBASIC18.33■□□□□ 0.52
RAD23BP54727 ELK2BP-201ENST00000415014 1224 ntBASIC18.33■□□□□ 0.52
RAD23BP54727 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD23BP54727 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD23BP54727 FDX1P1-201ENST00000449115 551 ntBASIC18.33■□□□□ 0.52
RAD23BP54727 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.33■□□□□ 0.52
RAD23BP54727 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.33■□□□□ 0.52
RAD23BP54727 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.33■□□□□ 0.52
RAD23BP54727 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.33■□□□□ 0.52
RAD23BP54727 AC006557.2-201ENST00000592985 1240 ntBASIC18.33■□□□□ 0.52
RAD23BP54727 MIR7706-201ENST00000613747 67 ntBASIC18.33■□□□□ 0.52
RAD23BP54727 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD23BP54727 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD23BP54727 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD23BP54727 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.33■□□□□ 0.52
RAD23BP54727 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD23BP54727 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.33■□□□□ 0.52
RAD23BP54727 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RAD23BP54727 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RAD23BP54727 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.33■□□□□ 0.52
RAD23BP54727 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAD23BP54727 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAD23BP54727 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAD23BP54727 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAD23BP54727 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAD23BP54727 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms