Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ATP1B3P54709 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 FAM220CP-201ENST00000395253 831 ntBASIC14.94□□□□□ -0.02
ATP1B3P54709 RCN1P1-201ENST00000400413 996 ntBASIC14.94□□□□□ -0.02
ATP1B3P54709 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
ATP1B3P54709 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.94□□□□□ -0.02
ATP1B3P54709 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 VENTXP7-201ENST00000475503 772 ntBASIC14.94□□□□□ -0.02
ATP1B3P54709 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 KRT8P26-201ENST00000534154 1276 ntBASIC14.94□□□□□ -0.02
ATP1B3P54709 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.94□□□□□ -0.02
ATP1B3P54709 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.94□□□□□ -0.02
ATP1B3P54709 AC019129.2-201ENST00000609837 1235 ntBASIC14.94□□□□□ -0.02
ATP1B3P54709 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
ATP1B3P54709 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ATP1B3P54709 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.94□□□□□ -0.02
ATP1B3P54709 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ATP1B3P54709 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.94□□□□□ -0.02
ATP1B3P54709 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ATP1B3P54709 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.94□□□□□ -0.02
ATP1B3P54709 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.94□□□□□ -0.02
ATP1B3P54709 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATP1B3P54709 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ATP1B3P54709 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.94□□□□□ -0.02
ATP1B3P54709 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
ATP1B3P54709 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.93□□□□□ -0.02
ATP1B3P54709 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ATP1B3P54709 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
ATP1B3P54709 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.93□□□□□ -0.02
ATP1B3P54709 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.93□□□□□ -0.02
ATP1B3P54709 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
ATP1B3P54709 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ATP1B3P54709 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.93□□□□□ -0.02
ATP1B3P54709 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.93□□□□□ -0.02
ATP1B3P54709 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.93□□□□□ -0.02
ATP1B3P54709 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.93□□□□□ -0.02
ATP1B3P54709 AL138831.2-201ENST00000606564 490 ntBASIC14.93□□□□□ -0.02
ATP1B3P54709 AL353801.3-201ENST00000609898 542 ntBASIC14.93□□□□□ -0.02
ATP1B3P54709 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
ATP1B3P54709 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ATP1B3P54709 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.93□□□□□ -0.02
ATP1B3P54709 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.93□□□□□ -0.02
ATP1B3P54709 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ATP1B3P54709 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.93□□□□□ -0.02
ATP1B3P54709 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.93□□□□□ -0.02
ATP1B3P54709 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.93□□□□□ -0.02
ATP1B3P54709 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATP1B3P54709 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ATP1B3P54709 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.92□□□□□ -0.02
ATP1B3P54709 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.92□□□□□ -0.02
ATP1B3P54709 AC093525.9-201ENST00000624961 1746 ntBASIC14.92□□□□□ -0.02
ATP1B3P54709 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ATP1B3P54709 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
ATP1B3P54709 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 AC046185.3-201ENST00000623228 1824 ntBASIC14.92□□□□□ -0.02
ATP1B3P54709 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.92□□□□□ -0.02
ATP1B3P54709 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.92□□□□□ -0.02
ATP1B3P54709 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
ATP1B3P54709 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATP1B3P54709 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
ATP1B3P54709 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms