Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A1P52655 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
GTF2A1P52655 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GTF2A1P52655 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GTF2A1P52655 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
GTF2A1P52655 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A1P52655 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GTF2A1P52655 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A1P52655 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
GTF2A1P52655 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A1P52655 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A1P52655 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 AC073210.2-201ENST00000430369 194 ntBASIC16.87■□□□□ 0.29
GTF2A1P52655 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A1P52655 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.87■□□□□ 0.29
GTF2A1P52655 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.87■□□□□ 0.29
GTF2A1P52655 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GTF2A1P52655 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 HEIH-201ENST00000623091 1652 ntBASIC16.87■□□□□ 0.29
GTF2A1P52655 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.87■□□□□ 0.29
GTF2A1P52655 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
GTF2A1P52655 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 AC097376.2-205ENST00000610159 5334 ntBASIC16.87■□□□□ 0.29
GTF2A1P52655 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A1P52655 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 AP006587.1-201ENST00000534129 1502 ntBASIC16.86■□□□□ 0.29
GTF2A1P52655 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.86■□□□□ 0.29
GTF2A1P52655 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.86■□□□□ 0.29
GTF2A1P52655 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.86■□□□□ 0.29
GTF2A1P52655 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.86■□□□□ 0.29
GTF2A1P52655 RPS2P52-201ENST00000469610 820 ntBASIC16.86■□□□□ 0.29
GTF2A1P52655 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.86■□□□□ 0.29
GTF2A1P52655 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.86■□□□□ 0.29
GTF2A1P52655 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 PID1-202ENST00000392054 2745 ntTSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.86■□□□□ 0.29
GTF2A1P52655 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 AC112777.1-201ENST00000540175 1423 ntBASIC16.86■□□□□ 0.29
GTF2A1P52655 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 AC078925.2-201ENST00000624013 1973 ntBASIC16.86■□□□□ 0.29
GTF2A1P52655 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A1P52655 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.86■□□□□ 0.29
GTF2A1P52655 AC087386.2-201ENST00000623212 4637 ntBASIC16.85■□□□□ 0.29
GTF2A1P52655 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.85■□□□□ 0.29
GTF2A1P52655 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.85■□□□□ 0.29
GTF2A1P52655 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.85■□□□□ 0.29
GTF2A1P52655 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 AC004911.1-201ENST00000416316 871 ntBASIC16.85■□□□□ 0.29
GTF2A1P52655 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.85■□□□□ 0.29
GTF2A1P52655 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.85■□□□□ 0.29
GTF2A1P52655 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms