Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL133338.1-201ENST00000565695 1517 ntBASIC18.95■□□□□ 0.62
BRCA2P51587 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCA2P51587 AC087289.5-201ENST00000586076 3175 ntBASIC18.95■□□□□ 0.62
BRCA2P51587 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCA2P51587 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.95■□□□□ 0.62
BRCA2P51587 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCA2P51587 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCA2P51587 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRCA2P51587 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCA2P51587 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCA2P51587 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCA2P51587 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCA2P51587 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.95■□□□□ 0.62
BRCA2P51587 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCA2P51587 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.95■□□□□ 0.62
BRCA2P51587 CTBP2P3-201ENST00000585629 1255 ntBASIC18.95■□□□□ 0.62
BRCA2P51587 AC007967.4-201ENST00000614700 386 ntBASIC18.95■□□□□ 0.62
BRCA2P51587 MIR6775-201ENST00000617557 69 ntBASIC18.95■□□□□ 0.62
BRCA2P51587 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.95■□□□□ 0.62
BRCA2P51587 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCA2P51587 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRCA2P51587 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRCA2P51587 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCA2P51587 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
BRCA2P51587 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.95■□□□□ 0.62
BRCA2P51587 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCA2P51587 AL844908.2-201ENST00000609461 460 ntBASIC18.95■□□□□ 0.62
BRCA2P51587 AC018529.1-201ENST00000613063 361 ntBASIC18.95■□□□□ 0.62
BRCA2P51587 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.95■□□□□ 0.62
BRCA2P51587 AP000974.1-201ENST00000623909 2387 ntBASIC18.95■□□□□ 0.62
BRCA2P51587 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 AC142381.1-201ENST00000426099 345 ntBASIC18.94■□□□□ 0.62
BRCA2P51587 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 CHCHD2P3-201ENST00000603038 451 ntBASIC18.94■□□□□ 0.62
BRCA2P51587 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.94■□□□□ 0.62
BRCA2P51587 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.94■□□□□ 0.62
BRCA2P51587 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
BRCA2P51587 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.94■□□□□ 0.62
BRCA2P51587 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
BRCA2P51587 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
BRCA2P51587 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.94■□□□□ 0.62
BRCA2P51587 AL138918.1-201ENST00000568306 659 ntBASIC18.94■□□□□ 0.62
BRCA2P51587 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCA2P51587 AC012569.1-201ENST00000591191 1524 ntBASIC18.94■□□□□ 0.62
BRCA2P51587 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.94■□□□□ 0.62
BRCA2P51587 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.93■□□□□ 0.62
BRCA2P51587 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 BTBD7P1-201ENST00000447253 1453 ntBASIC18.93■□□□□ 0.62
BRCA2P51587 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.93■□□□□ 0.62
BRCA2P51587 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.93■□□□□ 0.62
BRCA2P51587 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.93■□□□□ 0.62
BRCA2P51587 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCA2P51587 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCA2P51587 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.93■□□□□ 0.62
BRCA2P51587 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 AC046185.3-201ENST00000623228 1824 ntBASIC18.93■□□□□ 0.62
BRCA2P51587 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
BRCA2P51587 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 AC098614.1-201ENST00000368528 745 ntBASIC18.93■□□□□ 0.62
BRCA2P51587 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.93■□□□□ 0.62
BRCA2P51587 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
BRCA2P51587 DFFBP1-201ENST00000433250 979 ntBASIC18.93■□□□□ 0.62
BRCA2P51587 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.93■□□□□ 0.62
BRCA2P51587 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.93■□□□□ 0.62
BRCA2P51587 MIR3909-201ENST00000579518 119 ntBASIC18.93■□□□□ 0.62
BRCA2P51587 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.93■□□□□ 0.62
BRCA2P51587 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCA2P51587 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRCA2P51587 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms