Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.28■□□□□ 0.04
ASCL1P50553 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ASCL1P50553 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.28■□□□□ 0.04
ASCL1P50553 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ASCL1P50553 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ASCL1P50553 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.28■□□□□ 0.04
ASCL1P50553 LINC00982-205ENST00000420957 435 ntBASIC15.28■□□□□ 0.04
ASCL1P50553 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.28■□□□□ 0.04
ASCL1P50553 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.28■□□□□ 0.04
ASCL1P50553 ALG1L5P-201ENST00000482043 771 ntBASIC15.28■□□□□ 0.04
ASCL1P50553 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.28■□□□□ 0.04
ASCL1P50553 SNHG9-202ENST00000564014 471 ntBASIC15.28■□□□□ 0.04
ASCL1P50553 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 AC092865.6-201ENST00000642101 219 ntBASIC15.28■□□□□ 0.04
ASCL1P50553 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ASCL1P50553 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ASCL1P50553 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.27■□□□□ 0.04
ASCL1P50553 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.27■□□□□ 0.04
ASCL1P50553 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ASCL1P50553 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ASCL1P50553 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ASCL1P50553 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.27■□□□□ 0.04
ASCL1P50553 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
ASCL1P50553 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 PTCHD3P3-201ENST00000403073 906 ntBASIC15.27■□□□□ 0.04
ASCL1P50553 MKNK2P1-201ENST00000437526 628 ntBASIC15.27■□□□□ 0.04
ASCL1P50553 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.27■□□□□ 0.04
ASCL1P50553 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.27■□□□□ 0.04
ASCL1P50553 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.27■□□□□ 0.04
ASCL1P50553 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.27■□□□□ 0.04
ASCL1P50553 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.27■□□□□ 0.04
ASCL1P50553 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.27■□□□□ 0.04
ASCL1P50553 MIR4469-201ENST00000583919 79 ntBASIC15.27■□□□□ 0.04
ASCL1P50553 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ASCL1P50553 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.27■□□□□ 0.04
ASCL1P50553 AL596442.2-201ENST00000610240 980 ntBASIC15.27■□□□□ 0.04
ASCL1P50553 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ASCL1P50553 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ASCL1P50553 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ASCL1P50553 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ASCL1P50553 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ASCL1P50553 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ASCL1P50553 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ASCL1P50553 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.27■□□□□ 0.03
ASCL1P50553 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ASCL1P50553 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.27■□□□□ 0.03
ASCL1P50553 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ASCL1P50553 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.27■□□□□ 0.03
ASCL1P50553 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ASCL1P50553 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ASCL1P50553 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.27■□□□□ 0.03
ASCL1P50553 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ASCL1P50553 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms