Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA4P43681 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA4P43681 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHRNA4P43681 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.31■□□□□ 0.36
CHRNA4P43681 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA4P43681 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA4P43681 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA4P43681 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA4P43681 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA4P43681 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.31■□□□□ 0.36
CHRNA4P43681 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA4P43681 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA4P43681 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA4P43681 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA4P43681 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA4P43681 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA4P43681 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA4P43681 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA4P43681 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA4P43681 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA4P43681 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
CHRNA4P43681 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA4P43681 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 PKD1P1-201ENST00000458669 6805 ntBASIC17.3■□□□□ 0.36
CHRNA4P43681 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA4P43681 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA4P43681 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 RPS2P1-201ENST00000434010 821 ntBASIC17.3■□□□□ 0.36
CHRNA4P43681 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA4P43681 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA4P43681 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA4P43681 AC124947.2-201ENST00000547118 1133 ntBASIC17.3■□□□□ 0.36
CHRNA4P43681 AL121912.1-201ENST00000603683 238 ntBASIC17.3■□□□□ 0.36
CHRNA4P43681 AL139424.1-201ENST00000607572 797 ntBASIC17.3■□□□□ 0.36
CHRNA4P43681 AL589182.2-201ENST00000619332 1049 ntBASIC17.3■□□□□ 0.36
CHRNA4P43681 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA4P43681 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHRNA4P43681 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA4P43681 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA4P43681 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA4P43681 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA4P43681 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CHRNA4P43681 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHRNA4P43681 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA4P43681 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHRNA4P43681 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHRNA4P43681 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.29■□□□□ 0.36
CHRNA4P43681 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRNA4P43681 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
CHRNA4P43681 AC139887.3-201ENST00000568585 713 ntBASIC17.29■□□□□ 0.36
CHRNA4P43681 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 AL031008.1-201ENST00000619963 541 ntBASIC17.29■□□□□ 0.36
CHRNA4P43681 AC148477.8-201ENST00000624298 468 ntBASIC17.29■□□□□ 0.36
CHRNA4P43681 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
CHRNA4P43681 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA4P43681 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA4P43681 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 RNF216P1-203ENST00000404404 2427 ntBASIC17.29■□□□□ 0.36
CHRNA4P43681 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA4P43681 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA4P43681 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA4P43681 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA4P43681 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA4P43681 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA4P43681 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA4P43681 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CHRNA4P43681 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA4P43681 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms