Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC1A1P43005 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLC1A1P43005 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC1A1P43005 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC1A1P43005 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC1A1P43005 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.97■□□□□ 0.47
SLC1A1P43005 AP000867.3-201ENST00000524675 377 ntBASIC17.97■□□□□ 0.47
SLC1A1P43005 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC1A1P43005 NPAP1P7-201ENST00000613027 823 ntBASIC17.97■□□□□ 0.47
SLC1A1P43005 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLC1A1P43005 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLC1A1P43005 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLC1A1P43005 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A1P43005 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC1A1P43005 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC1A1P43005 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A1P43005 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A1P43005 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
SLC1A1P43005 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A1P43005 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC1A1P43005 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC1A1P43005 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC1A1P43005 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC1A1P43005 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 MIR5100-201ENST00000579544 119 ntBASIC17.96■□□□□ 0.47
SLC1A1P43005 AC069148.1-201ENST00000608741 768 ntBASIC17.96■□□□□ 0.47
SLC1A1P43005 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.96■□□□□ 0.47
SLC1A1P43005 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC1A1P43005 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC1A1P43005 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.96■□□□□ 0.47
SLC1A1P43005 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
SLC1A1P43005 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLC1A1P43005 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A1P43005 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC1A1P43005 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A1P43005 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
SLC1A1P43005 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A1P43005 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A1P43005 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A1P43005 PCDHB17P-201ENST00000539533 2393 ntBASIC17.95■□□□□ 0.46
SLC1A1P43005 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A1P43005 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A1P43005 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A1P43005 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC1A1P43005 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A1P43005 ATP5G2P1-201ENST00000433580 426 ntBASIC17.95■□□□□ 0.46
SLC1A1P43005 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A1P43005 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A1P43005 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC1A1P43005 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A1P43005 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A1P43005 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A1P43005 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC1A1P43005 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A1P43005 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A1P43005 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC1A1P43005 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
SLC1A1P43005 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms