Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF9P41273 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF9P41273 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.51■□□□□ 0.55
TNFSF9P41273 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF9P41273 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TNFSF9P41273 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF9P41273 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TNFSF9P41273 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TNFSF9P41273 AC023274.1-201ENST00000418278 595 ntBASIC18.51■□□□□ 0.55
TNFSF9P41273 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.51■□□□□ 0.55
TNFSF9P41273 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF9P41273 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.51■□□□□ 0.55
TNFSF9P41273 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.51■□□□□ 0.55
TNFSF9P41273 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
TNFSF9P41273 REXO1L3P-201ENST00000622202 1288 ntBASIC18.51■□□□□ 0.55
TNFSF9P41273 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.51■□□□□ 0.55
TNFSF9P41273 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF9P41273 HCG11-201ENST00000411553 5696 ntBASIC18.51■□□□□ 0.55
TNFSF9P41273 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.51■□□□□ 0.55
TNFSF9P41273 AC060834.1-201ENST00000443027 2032 ntBASIC18.5■□□□□ 0.55
TNFSF9P41273 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
TNFSF9P41273 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFSF9P41273 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 AP001094.4-201ENST00000579008 2176 ntBASIC18.5■□□□□ 0.55
TNFSF9P41273 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.5■□□□□ 0.55
TNFSF9P41273 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TNFSF9P41273 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TNFSF9P41273 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TNFSF9P41273 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.5■□□□□ 0.55
TNFSF9P41273 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TNFSF9P41273 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.5■□□□□ 0.55
TNFSF9P41273 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.5■□□□□ 0.55
TNFSF9P41273 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFSF9P41273 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.5■□□□□ 0.55
TNFSF9P41273 ACTL9-202ENST00000612068 1252 ntBASIC18.5■□□□□ 0.55
TNFSF9P41273 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFSF9P41273 AC092865.6-201ENST00000642101 219 ntBASIC18.5■□□□□ 0.55
TNFSF9P41273 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TNFSF9P41273 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.5■□□□□ 0.55
TNFSF9P41273 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.5■□□□□ 0.55
TNFSF9P41273 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF9P41273 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.5■□□□□ 0.55
TNFSF9P41273 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TNFSF9P41273 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFSF9P41273 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFSF9P41273 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFSF9P41273 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 CXCL1P1-201ENST00000502804 216 ntBASIC18.49■□□□□ 0.55
TNFSF9P41273 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.49■□□□□ 0.55
TNFSF9P41273 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFSF9P41273 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFSF9P41273 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.49■□□□□ 0.55
TNFSF9P41273 AL513190.1-201ENST00000621254 727 ntBASIC18.49■□□□□ 0.55
TNFSF9P41273 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFSF9P41273 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFSF9P41273 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TNFSF9P41273 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TNFSF9P41273 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF9P41273 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFSF9P41273 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFSF9P41273 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF9P41273 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF9P41273 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TNFSF9P41273 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF9P41273 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFSF9P41273 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFSF9P41273 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF9P41273 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFSF9P41273 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF9P41273 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFSF9P41273 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFSF9P41273 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.48■□□□□ 0.55
TNFSF9P41273 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF9P41273 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms