Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.59■■□□□ 1.05
COL15A1P39059 RN7SL204P-201ENST00000582831 262 ntBASIC21.59■■□□□ 1.05
COL15A1P39059 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.59■■□□□ 1.05
COL15A1P39059 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.59■■□□□ 1.05
COL15A1P39059 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
COL15A1P39059 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL15A1P39059 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL15A1P39059 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.58■■□□□ 1.05
COL15A1P39059 AC012569.1-201ENST00000591191 1524 ntBASIC21.58■■□□□ 1.05
COL15A1P39059 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
COL15A1P39059 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL15A1P39059 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.58■■□□□ 1.05
COL15A1P39059 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL15A1P39059 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL15A1P39059 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL15A1P39059 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.58■■□□□ 1.04
COL15A1P39059 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.58■■□□□ 1.04
COL15A1P39059 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL15A1P39059 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL15A1P39059 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.58■■□□□ 1.04
COL15A1P39059 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.58■■□□□ 1.04
COL15A1P39059 TERF1P3-201ENST00000505638 1227 ntBASIC21.58■■□□□ 1.04
COL15A1P39059 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.58■■□□□ 1.04
COL15A1P39059 IGHV3-62-201ENST00000520057 340 ntBASIC21.58■■□□□ 1.04
COL15A1P39059 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.58■■□□□ 1.04
COL15A1P39059 KRT8P23-201ENST00000560090 1207 ntBASIC21.58■■□□□ 1.04
COL15A1P39059 AL390754.1-201ENST00000619088 582 ntBASIC21.58■■□□□ 1.04
COL15A1P39059 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL15A1P39059 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL15A1P39059 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
COL15A1P39059 UXT-AS1-201ENST00000590504 1525 ntBASIC21.58■■□□□ 1.04
COL15A1P39059 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL15A1P39059 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.58■■□□□ 1.04
COL15A1P39059 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL15A1P39059 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
COL15A1P39059 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL15A1P39059 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.57■■□□□ 1.04
COL15A1P39059 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COL15A1P39059 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.57■■□□□ 1.04
COL15A1P39059 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 AC244107.1-201ENST00000442033 332 ntBASIC21.57■■□□□ 1.04
COL15A1P39059 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.57■■□□□ 1.04
COL15A1P39059 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.57■■□□□ 1.04
COL15A1P39059 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.57■■□□□ 1.04
COL15A1P39059 AL035252.4-201ENST00000624174 288 ntBASIC21.57■■□□□ 1.04
COL15A1P39059 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.57■■□□□ 1.04
COL15A1P39059 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
COL15A1P39059 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL15A1P39059 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.56■■□□□ 1.04
COL15A1P39059 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COL15A1P39059 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 AC016396.2-201ENST00000562575 1417 ntBASIC21.56■■□□□ 1.04
COL15A1P39059 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COL15A1P39059 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.56■■□□□ 1.04
COL15A1P39059 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.56■■□□□ 1.04
COL15A1P39059 TSPY16P-201ENST00000449843 468 ntBASIC21.56■■□□□ 1.04
COL15A1P39059 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.56■■□□□ 1.04
COL15A1P39059 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.56■■□□□ 1.04
COL15A1P39059 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.56■■□□□ 1.04
COL15A1P39059 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.56■■□□□ 1.04
COL15A1P39059 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.56■■□□□ 1.04
COL15A1P39059 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL15A1P39059 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.55■■□□□ 1.04
COL15A1P39059 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
COL15A1P39059 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
COL15A1P39059 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.55■■□□□ 1.04
COL15A1P39059 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
COL15A1P39059 AL158211.3-201ENST00000607385 239 ntBASIC21.55■■□□□ 1.04
COL15A1P39059 AC012645.4-201ENST00000610691 1061 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms