Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCLP35914 DUX4L17-201ENST00000557360 1267 ntBASIC17.06■□□□□ 0.32
HMGCLP35914 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
HMGCLP35914 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCLP35914 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGCLP35914 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HMGCLP35914 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMGCLP35914 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGCLP35914 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCLP35914 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HMGCLP35914 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCLP35914 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HMGCLP35914 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGCLP35914 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCLP35914 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HMGCLP35914 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HMGCLP35914 AC098831.1-202ENST00000438821 336 ntBASIC17.05■□□□□ 0.32
HMGCLP35914 IGHV3-22-201ENST00000520721 359 ntBASIC17.05■□□□□ 0.32
HMGCLP35914 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGCLP35914 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGCLP35914 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGCLP35914 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGCLP35914 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCLP35914 AL121761.2-201ENST00000598007 1648 ntBASIC17.05■□□□□ 0.32
HMGCLP35914 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCLP35914 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGCLP35914 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCLP35914 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCLP35914 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCLP35914 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HMGCLP35914 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCLP35914 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
HMGCLP35914 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HMGCLP35914 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCLP35914 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.04■□□□□ 0.32
HMGCLP35914 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMGCLP35914 AC087163.2-201ENST00000457299 853 ntBASIC17.04■□□□□ 0.32
HMGCLP35914 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.04■□□□□ 0.32
HMGCLP35914 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCLP35914 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.04■□□□□ 0.32
HMGCLP35914 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.04■□□□□ 0.32
HMGCLP35914 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCLP35914 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGCLP35914 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HMGCLP35914 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGCLP35914 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms