Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN6P29350 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTPN6P29350 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PTPN6P29350 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
PTPN6P29350 TSPY19P-201ENST00000418461 509 ntBASIC16.3■□□□□ 0.2
PTPN6P29350 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPN6P29350 TSPY18P-201ENST00000441642 509 ntBASIC16.3■□□□□ 0.2
PTPN6P29350 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPN6P29350 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPN6P29350 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN6P29350 AC111152.3-201ENST00000569699 673 ntBASIC16.3■□□□□ 0.2
PTPN6P29350 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 AC138894.3-201ENST00000603787 634 ntBASIC16.3■□□□□ 0.2
PTPN6P29350 AL121772.3-201ENST00000610840 674 ntBASIC16.3■□□□□ 0.2
PTPN6P29350 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PTPN6P29350 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTPN6P29350 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN6P29350 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PTPN6P29350 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN6P29350 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTPN6P29350 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN6P29350 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
PTPN6P29350 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTPN6P29350 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTPN6P29350 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN6P29350 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN6P29350 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN6P29350 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN6P29350 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN6P29350 BNIP3P18-201ENST00000593976 575 ntBASIC16.29■□□□□ 0.2
PTPN6P29350 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN6P29350 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN6P29350 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PTPN6P29350 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTPN6P29350 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN6P29350 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
PTPN6P29350 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN6P29350 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 PCDH8P1-201ENST00000428983 2773 ntBASIC16.28■□□□□ 0.2
PTPN6P29350 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN6P29350 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN6P29350 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN6P29350 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PTPN6P29350 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN6P29350 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN6P29350 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN6P29350 AD001527.2-201ENST00000622994 785 ntBASIC16.28■□□□□ 0.2
PTPN6P29350 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN6P29350 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN6P29350 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN6P29350 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PTPN6P29350 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PTPN6P29350 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN6P29350 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN6P29350 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms