Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTGFP29279 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTGFP29279 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CTGFP29279 LINC00895-201ENST00000629028 1637 ntBASIC19.1■□□□□ 0.65
CTGFP29279 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CTGFP29279 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTGFP29279 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTGFP29279 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTGFP29279 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CTGFP29279 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CTGFP29279 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.09■□□□□ 0.65
CTGFP29279 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CTGFP29279 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTGFP29279 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTGFP29279 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTGFP29279 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.09■□□□□ 0.65
CTGFP29279 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTGFP29279 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.09■□□□□ 0.65
CTGFP29279 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTGFP29279 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.09■□□□□ 0.65
CTGFP29279 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTGFP29279 AL512384.1-201ENST00000406683 331 ntBASIC19.09■□□□□ 0.65
CTGFP29279 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTGFP29279 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTGFP29279 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.09■□□□□ 0.65
CTGFP29279 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.09■□□□□ 0.65
CTGFP29279 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTGFP29279 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.09■□□□□ 0.65
CTGFP29279 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.09■□□□□ 0.65
CTGFP29279 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CTGFP29279 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTGFP29279 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.09■□□□□ 0.65
CTGFP29279 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTGFP29279 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTGFP29279 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CTGFP29279 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.08■□□□□ 0.65
CTGFP29279 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
CTGFP29279 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTGFP29279 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTGFP29279 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTGFP29279 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.08■□□□□ 0.65
CTGFP29279 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.08■□□□□ 0.65
CTGFP29279 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.08■□□□□ 0.65
CTGFP29279 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTGFP29279 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTGFP29279 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.08■□□□□ 0.64
CTGFP29279 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTGFP29279 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.08■□□□□ 0.64
CTGFP29279 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.08■□□□□ 0.64
CTGFP29279 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.08■□□□□ 0.64
CTGFP29279 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTGFP29279 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CTGFP29279 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTGFP29279 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.08■□□□□ 0.64
CTGFP29279 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.08■□□□□ 0.64
CTGFP29279 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CTGFP29279 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTGFP29279 AC138028.4-201ENST00000564984 1845 ntBASIC19.08■□□□□ 0.64
CTGFP29279 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
CTGFP29279 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTGFP29279 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.08■□□□□ 0.64
CTGFP29279 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTGFP29279 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CTGFP29279 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
CTGFP29279 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTGFP29279 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CTGFP29279 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTGFP29279 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.07■□□□□ 0.64
CTGFP29279 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.07■□□□□ 0.64
CTGFP29279 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.07■□□□□ 0.64
CTGFP29279 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTGFP29279 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CTGFP29279 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.07■□□□□ 0.64
CTGFP29279 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTGFP29279 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTGFP29279 MIR658-201ENST00000385210 100 ntBASIC19.07■□□□□ 0.64
CTGFP29279 MPDU1-223ENST00000582151 728 ntBASIC19.07■□□□□ 0.64
CTGFP29279 MIR4259-201ENST00000584466 101 ntBASIC19.07■□□□□ 0.64
CTGFP29279 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
CTGFP29279 AC131009.4-201ENST00000624048 1740 ntBASIC19.07■□□□□ 0.64
CTGFP29279 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CTGFP29279 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.07■□□□□ 0.64
CTGFP29279 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.07■□□□□ 0.64
CTGFP29279 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTGFP29279 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.07■□□□□ 0.64
CTGFP29279 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.07■□□□□ 0.64
CTGFP29279 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTGFP29279 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
CTGFP29279 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.06■□□□□ 0.64
CTGFP29279 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTGFP29279 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTGFP29279 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTGFP29279 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.06■□□□□ 0.64
CTGFP29279 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.06■□□□□ 0.64
CTGFP29279 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTGFP29279 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.06■□□□□ 0.64
CTGFP29279 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTGFP29279 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.06■□□□□ 0.64
CTGFP29279 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTGFP29279 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms