Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.34■□□□□ 0.37
XPAP23025 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.34■□□□□ 0.37
XPAP23025 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
XPAP23025 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.34■□□□□ 0.37
XPAP23025 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.34■□□□□ 0.37
XPAP23025 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
XPAP23025 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
XPAP23025 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
XPAP23025 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
XPAP23025 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
XPAP23025 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.33■□□□□ 0.36
XPAP23025 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
XPAP23025 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
XPAP23025 PTCHD3P3-201ENST00000403073 906 ntBASIC17.33■□□□□ 0.36
XPAP23025 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.33■□□□□ 0.36
XPAP23025 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.33■□□□□ 0.36
XPAP23025 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
XPAP23025 MIR4751-201ENST00000578027 74 ntBASIC17.33■□□□□ 0.36
XPAP23025 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.33■□□□□ 0.36
XPAP23025 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
XPAP23025 TERC-201ENST00000602385 541 ntBASIC17.33■□□□□ 0.36
XPAP23025 AL805961.1-202ENST00000641562 540 ntBASIC17.33■□□□□ 0.36
XPAP23025 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
XPAP23025 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
XPAP23025 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
XPAP23025 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.33■□□□□ 0.36
XPAP23025 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
XPAP23025 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.33■□□□□ 0.36
XPAP23025 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.33■□□□□ 0.36
XPAP23025 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
XPAP23025 PI4KAP1-204ENST00000612579 1703 ntBASIC17.33■□□□□ 0.36
XPAP23025 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
XPAP23025 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
XPAP23025 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
XPAP23025 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
XPAP23025 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.32■□□□□ 0.36
XPAP23025 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
XPAP23025 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
XPAP23025 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 AP002414.1-201ENST00000391405 1147 ntBASIC17.32■□□□□ 0.36
XPAP23025 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.32■□□□□ 0.36
XPAP23025 AC027601.4-201ENST00000611259 610 ntBASIC17.32■□□□□ 0.36
XPAP23025 GGTLC5P-201ENST00000617623 998 ntBASIC17.32■□□□□ 0.36
XPAP23025 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
XPAP23025 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.32■□□□□ 0.36
XPAP23025 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
XPAP23025 AL138688.1-201ENST00000624851 1594 ntBASIC17.32■□□□□ 0.36
XPAP23025 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
XPAP23025 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
XPAP23025 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
XPAP23025 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
XPAP23025 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
XPAP23025 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
XPAP23025 AC016396.2-201ENST00000562575 1417 ntBASIC17.31■□□□□ 0.36
XPAP23025 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
XPAP23025 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
XPAP23025 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
XPAP23025 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
XPAP23025 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
XPAP23025 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XPAP23025 MIR574-201ENST00000385209 96 ntBASIC17.31■□□□□ 0.36
XPAP23025 MED15P5-201ENST00000423150 992 ntBASIC17.31■□□□□ 0.36
XPAP23025 AC009947.1-201ENST00000444350 727 ntBASIC17.31■□□□□ 0.36
XPAP23025 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.31■□□□□ 0.36
XPAP23025 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.31■□□□□ 0.36
XPAP23025 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.31■□□□□ 0.36
XPAP23025 AC008667.4-201ENST00000607370 168 ntBASIC17.31■□□□□ 0.36
XPAP23025 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XPAP23025 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
XPAP23025 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
XPAP23025 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XPAP23025 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.31■□□□□ 0.36
XPAP23025 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XPAP23025 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
XPAP23025 AC026471.1-201ENST00000564629 3026 ntBASIC17.31■□□□□ 0.36
XPAP23025 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
XPAP23025 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
XPAP23025 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms