Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SDHBP21912 SIRPAP1-201ENST00000448467 1770 ntBASIC16.78■□□□□ 0.28
SDHBP21912 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SDHBP21912 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SDHBP21912 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SDHBP21912 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
SDHBP21912 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHBP21912 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHBP21912 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHBP21912 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHBP21912 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SDHBP21912 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SDHBP21912 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SDHBP21912 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.77■□□□□ 0.28
SDHBP21912 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SDHBP21912 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SDHBP21912 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.77■□□□□ 0.28
SDHBP21912 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SDHBP21912 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SDHBP21912 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.77■□□□□ 0.28
SDHBP21912 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SDHBP21912 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SDHBP21912 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.77■□□□□ 0.28
SDHBP21912 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SDHBP21912 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SDHBP21912 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SDHBP21912 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SDHBP21912 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.77■□□□□ 0.28
SDHBP21912 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.77■□□□□ 0.28
SDHBP21912 SPDYE14P-201ENST00000442619 822 ntBASIC16.77■□□□□ 0.28
SDHBP21912 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.77■□□□□ 0.28
SDHBP21912 AC011495.1-201ENST00000498085 584 ntBASIC16.77■□□□□ 0.28
SDHBP21912 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SDHBP21912 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.77■□□□□ 0.28
SDHBP21912 ACTL9-202ENST00000612068 1252 ntBASIC16.77■□□□□ 0.28
SDHBP21912 AC084121.4-201ENST00000641598 221 ntBASIC16.77■□□□□ 0.28
SDHBP21912 AF228730.8-201ENST00000642140 221 ntBASIC16.77■□□□□ 0.28
SDHBP21912 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SDHBP21912 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SDHBP21912 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SDHBP21912 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SDHBP21912 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.77■□□□□ 0.27
SDHBP21912 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SDHBP21912 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SDHBP21912 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SDHBP21912 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
SDHBP21912 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SDHBP21912 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SDHBP21912 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SDHBP21912 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.77■□□□□ 0.27
SDHBP21912 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SDHBP21912 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.76■□□□□ 0.27
SDHBP21912 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SDHBP21912 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SDHBP21912 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 MIR1909-201ENST00000411312 80 ntBASIC16.76■□□□□ 0.27
SDHBP21912 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.76■□□□□ 0.27
SDHBP21912 AL353779.1-201ENST00000434793 351 ntBASIC16.76■□□□□ 0.27
SDHBP21912 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.76■□□□□ 0.27
SDHBP21912 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SDHBP21912 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.76■□□□□ 0.27
SDHBP21912 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.76■□□□□ 0.27
SDHBP21912 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.76■□□□□ 0.27
SDHBP21912 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SDHBP21912 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SDHBP21912 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
SDHBP21912 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHBP21912 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.76■□□□□ 0.27
SDHBP21912 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.76■□□□□ 0.27
SDHBP21912 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHBP21912 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHBP21912 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SDHBP21912 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SDHBP21912 AC067852.2-201ENST00000590513 2313 ntBASIC16.75■□□□□ 0.27
SDHBP21912 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SDHBP21912 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHBP21912 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHBP21912 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SDHBP21912 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHBP21912 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHBP21912 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SDHBP21912 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SDHBP21912 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.75■□□□□ 0.27
SDHBP21912 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
SDHBP21912 SPCS2P4-201ENST00000436160 681 ntBASIC16.75■□□□□ 0.27
SDHBP21912 ACA64.2-201ENST00000459014 129 ntBASIC16.75■□□□□ 0.27
SDHBP21912 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms