Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP4AP20648 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP4AP20648 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
ATP4AP20648 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP4AP20648 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP4AP20648 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP4AP20648 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP4AP20648 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP4AP20648 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP4AP20648 AC211486.1-202ENST00000416371 468 ntBASIC18.97■□□□□ 0.63
ATP4AP20648 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATP4AP20648 AC211476.1-201ENST00000503899 468 ntBASIC18.97■□□□□ 0.63
ATP4AP20648 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP4AP20648 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP4AP20648 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP4AP20648 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP4AP20648 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP4AP20648 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ATP4AP20648 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP4AP20648 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP4AP20648 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP4AP20648 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATP4AP20648 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP4AP20648 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP4AP20648 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP4AP20648 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP4AP20648 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 MKNK2P1-201ENST00000437526 628 ntBASIC18.96■□□□□ 0.63
ATP4AP20648 DNAJB3-202ENST00000449667 1266 ntBASIC18.96■□□□□ 0.63
ATP4AP20648 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP4AP20648 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATP4AP20648 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 AP002472.1-201ENST00000577490 586 ntBASIC18.96■□□□□ 0.63
ATP4AP20648 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATP4AP20648 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP4AP20648 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP4AP20648 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATP4AP20648 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP4AP20648 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATP4AP20648 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.95■□□□□ 0.62
ATP4AP20648 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 FRMD8P1-201ENST00000440433 1524 ntBASIC18.95■□□□□ 0.62
ATP4AP20648 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP4AP20648 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP4AP20648 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP4AP20648 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATP4AP20648 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.95■□□□□ 0.62
ATP4AP20648 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
ATP4AP20648 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.95■□□□□ 0.62
ATP4AP20648 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.95■□□□□ 0.62
ATP4AP20648 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.95■□□□□ 0.62
ATP4AP20648 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP4AP20648 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.95■□□□□ 0.62
ATP4AP20648 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP4AP20648 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.95■□□□□ 0.62
ATP4AP20648 AC092902.6-201ENST00000641783 218 ntBASIC18.95■□□□□ 0.62
ATP4AP20648 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP4AP20648 ELL2P1-201ENST00000413990 1906 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms