Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SLC25A6P4-201ENST00000586535 553 ntBASIC14.18□□□□□ -0.14
CCL3L1P16619 AL049840.3-201ENST00000602669 611 ntBASIC14.18□□□□□ -0.14
CCL3L1P16619 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.18□□□□□ -0.14
CCL3L1P16619 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL3L1P16619 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL3L1P16619 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
CCL3L1P16619 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL3L1P16619 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL3L1P16619 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCL3L1P16619 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 LINC02012-201ENST00000608206 1725 ntBASIC14.18□□□□□ -0.14
CCL3L1P16619 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL3L1P16619 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCL3L1P16619 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
CCL3L1P16619 AC092053.1-201ENST00000605787 1936 ntBASIC14.17□□□□□ -0.14
CCL3L1P16619 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCL3L1P16619 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCL3L1P16619 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCL3L1P16619 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL3L1P16619 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL3L1P16619 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL3L1P16619 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCL3L1P16619 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL3L1P16619 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 AL031284.1-201ENST00000419297 478 ntBASIC14.17□□□□□ -0.14
CCL3L1P16619 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCL3L1P16619 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.17□□□□□ -0.14
CCL3L1P16619 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL3L1P16619 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.17□□□□□ -0.14
CCL3L1P16619 AC012640.2-201ENST00000561606 901 ntBASIC14.17□□□□□ -0.14
CCL3L1P16619 AC006557.2-201ENST00000592985 1240 ntBASIC14.17□□□□□ -0.14
CCL3L1P16619 MIR7706-201ENST00000613747 67 ntBASIC14.17□□□□□ -0.14
CCL3L1P16619 FAM215A-202ENST00000632077 792 ntBASIC14.17□□□□□ -0.14
CCL3L1P16619 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCL3L1P16619 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCL3L1P16619 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL3L1P16619 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL3L1P16619 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL3L1P16619 AC006504.4-201ENST00000592118 1568 ntBASIC14.17□□□□□ -0.14
CCL3L1P16619 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL3L1P16619 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCL3L1P16619 AL590787.1-201ENST00000568856 1315 ntBASIC14.16□□□□□ -0.14
CCL3L1P16619 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL3L1P16619 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCL3L1P16619 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL3L1P16619 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCL3L1P16619 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCL3L1P16619 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCL3L1P16619 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL3L1P16619 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL3L1P16619 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL3L1P16619 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CCL3L1P16619 AC008735.5-201ENST00000623544 497 ntBASIC14.16□□□□□ -0.14
CCL3L1P16619 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 AP002414.3-201ENST00000589352 1468 ntBASIC14.16□□□□□ -0.14
CCL3L1P16619 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL3L1P16619 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms