Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PPP3CBP16298 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PPP3CBP16298 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PPP3CBP16298 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PPP3CBP16298 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.46■□□□□ 0.07
PPP3CBP16298 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PPP3CBP16298 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PPP3CBP16298 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PPP3CBP16298 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PPP3CBP16298 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.46■□□□□ 0.06
PPP3CBP16298 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PPP3CBP16298 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PPP3CBP16298 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PPP3CBP16298 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
PPP3CBP16298 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PPP3CBP16298 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PPP3CBP16298 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.45■□□□□ 0.06
PPP3CBP16298 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.45■□□□□ 0.06
PPP3CBP16298 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.45■□□□□ 0.06
PPP3CBP16298 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.45■□□□□ 0.06
PPP3CBP16298 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.45■□□□□ 0.06
PPP3CBP16298 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PPP3CBP16298 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.45■□□□□ 0.06
PPP3CBP16298 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PPP3CBP16298 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.45■□□□□ 0.06
PPP3CBP16298 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.45■□□□□ 0.06
PPP3CBP16298 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.45■□□□□ 0.06
PPP3CBP16298 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PPP3CBP16298 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.45■□□□□ 0.06
PPP3CBP16298 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 AL023806.1-201ENST00000603994 1649 ntBASIC15.45■□□□□ 0.06
PPP3CBP16298 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PPP3CBP16298 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 ZNF259P1-201ENST00000407656 1365 ntBASIC15.45■□□□□ 0.06
PPP3CBP16298 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PPP3CBP16298 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PPP3CBP16298 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.44■□□□□ 0.06
PPP3CBP16298 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.44■□□□□ 0.06
PPP3CBP16298 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 AC079776.2-201ENST00000641154 1609 ntBASIC15.44■□□□□ 0.06
PPP3CBP16298 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.44■□□□□ 0.06
PPP3CBP16298 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PPP3CBP16298 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 KRT18P58-201ENST00000527480 1120 ntBASIC15.44■□□□□ 0.06
PPP3CBP16298 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.44■□□□□ 0.06
PPP3CBP16298 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.44■□□□□ 0.06
PPP3CBP16298 NKAPP1-205ENST00000585790 367 ntBASIC15.44■□□□□ 0.06
PPP3CBP16298 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.44■□□□□ 0.06
PPP3CBP16298 MIR7706-201ENST00000613747 67 ntBASIC15.44■□□□□ 0.06
PPP3CBP16298 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.44■□□□□ 0.06
PPP3CBP16298 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 AD001527.2-201ENST00000622994 785 ntBASIC15.44■□□□□ 0.06
PPP3CBP16298 AC073592.4-201ENST00000623827 446 ntBASIC15.44■□□□□ 0.06
PPP3CBP16298 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PPP3CBP16298 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 AL022326.1-202ENST00000641533 845 ntBASIC15.44■□□□□ 0.06
PPP3CBP16298 AF228730.7-201ENST00000641842 219 ntBASIC15.44■□□□□ 0.06
PPP3CBP16298 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 KRT8P47-201ENST00000604727 1398 ntBASIC15.44■□□□□ 0.06
PPP3CBP16298 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
PPP3CBP16298 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 PMPCAP1-201ENST00000508114 1576 ntBASIC15.44■□□□□ 0.06
PPP3CBP16298 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms