Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ITGB4P16144 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.68■■□□□ 1.06
ITGB4P16144 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ITGB4P16144 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.67■■□□□ 1.06
ITGB4P16144 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ITGB4P16144 AC093525.9-201ENST00000624961 1746 ntBASIC21.67■■□□□ 1.06
ITGB4P16144 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
ITGB4P16144 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
ITGB4P16144 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ITGB4P16144 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.67■■□□□ 1.06
ITGB4P16144 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ITGB4P16144 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.67■■□□□ 1.06
ITGB4P16144 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.67■■□□□ 1.06
ITGB4P16144 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.67■■□□□ 1.06
ITGB4P16144 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ITGB4P16144 AC004408.2-201ENST00000623613 2777 ntBASIC21.67■■□□□ 1.06
ITGB4P16144 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ITGB4P16144 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ITGB4P16144 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ITGB4P16144 KRT8P49-201ENST00000604166 1432 ntBASIC21.67■■□□□ 1.06
ITGB4P16144 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.66■■□□□ 1.06
ITGB4P16144 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
ITGB4P16144 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.66■■□□□ 1.06
ITGB4P16144 AC027307.3-201ENST00000594262 1100 ntBASIC21.66■■□□□ 1.06
ITGB4P16144 AC003101.2-201ENST00000612557 442 ntBASIC21.66■■□□□ 1.06
ITGB4P16144 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.66■■□□□ 1.06
ITGB4P16144 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.66■■□□□ 1.06
ITGB4P16144 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ITGB4P16144 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITGB4P16144 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.66■■□□□ 1.06
ITGB4P16144 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITGB4P16144 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITGB4P16144 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.66■■□□□ 1.06
ITGB4P16144 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.66■■□□□ 1.06
ITGB4P16144 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.66■■□□□ 1.06
ITGB4P16144 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.66■■□□□ 1.06
ITGB4P16144 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITGB4P16144 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.66■■□□□ 1.06
ITGB4P16144 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITGB4P16144 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
ITGB4P16144 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITGB4P16144 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.66■■□□□ 1.06
ITGB4P16144 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITGB4P16144 AL512638.1-201ENST00000457493 794 ntBASIC21.66■■□□□ 1.06
ITGB4P16144 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.66■■□□□ 1.06
ITGB4P16144 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.66■■□□□ 1.06
ITGB4P16144 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITGB4P16144 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.66■■□□□ 1.06
ITGB4P16144 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ITGB4P16144 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ITGB4P16144 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ITGB4P16144 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.65■■□□□ 1.06
ITGB4P16144 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ITGB4P16144 CU639417.3-201ENST00000624240 1404 ntBASIC21.65■■□□□ 1.06
ITGB4P16144 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.65■■□□□ 1.06
ITGB4P16144 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ITGB4P16144 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ITGB4P16144 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.65■■□□□ 1.06
ITGB4P16144 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.65■■□□□ 1.06
ITGB4P16144 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ITGB4P16144 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.65■■□□□ 1.06
ITGB4P16144 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.65■■□□□ 1.06
ITGB4P16144 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
ITGB4P16144 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.65■■□□□ 1.06
ITGB4P16144 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.65■■□□□ 1.06
ITGB4P16144 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ITGB4P16144 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ITGB4P16144 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.65■■□□□ 1.06
ITGB4P16144 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ITGB4P16144 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ITGB4P16144 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
ITGB4P16144 AL021920.2-201ENST00000624828 1351 ntBASIC21.64■■□□□ 1.06
ITGB4P16144 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.64■■□□□ 1.06
ITGB4P16144 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
ITGB4P16144 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ITGB4P16144 CR383656.12-201ENST00000549567 513 ntBASIC21.64■■□□□ 1.06
ITGB4P16144 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.64■■□□□ 1.06
ITGB4P16144 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.64■■□□□ 1.06
ITGB4P16144 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.64■■□□□ 1.06
ITGB4P16144 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.64■■□□□ 1.06
ITGB4P16144 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ITGB4P16144 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ITGB4P16144 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.64■■□□□ 1.06
ITGB4P16144 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.64■■□□□ 1.05
ITGB4P16144 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ITGB4P16144 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ITGB4P16144 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
ITGB4P16144 IGHV3-71-201ENST00000523324 359 ntBASIC21.64■■□□□ 1.05
ITGB4P16144 API5-211ENST00000534695 560 ntTSL 5 BASIC21.64■■□□□ 1.05
ITGB4P16144 AC140912.1-201ENST00000577171 1054 ntBASIC21.64■■□□□ 1.05
ITGB4P16144 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ITGB4P16144 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ITGB4P16144 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ITGB4P16144 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.64■■□□□ 1.05
ITGB4P16144 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ITGB4P16144 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.63■■□□□ 1.05
ITGB4P16144 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ITGB4P16144 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ITGB4P16144 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.63■■□□□ 1.05
ITGB4P16144 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms