Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LAMP1P11279 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LAMP1P11279 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LAMP1P11279 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
LAMP1P11279 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LAMP1P11279 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LAMP1P11279 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.28■□□□□ 0.2
LAMP1P11279 POM121L3P-201ENST00000419331 1163 ntBASIC16.28■□□□□ 0.2
LAMP1P11279 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LAMP1P11279 AC104819.1-201ENST00000504587 486 ntBASIC16.28■□□□□ 0.2
LAMP1P11279 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.28■□□□□ 0.2
LAMP1P11279 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.28■□□□□ 0.2
LAMP1P11279 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LAMP1P11279 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LAMP1P11279 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LAMP1P11279 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.28■□□□□ 0.2
LAMP1P11279 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LAMP1P11279 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LAMP1P11279 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LAMP1P11279 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.28■□□□□ 0.2
LAMP1P11279 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LAMP1P11279 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.28■□□□□ 0.2
LAMP1P11279 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LAMP1P11279 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 AC079328.2-201ENST00000561241 3354 ntBASIC16.27■□□□□ 0.2
LAMP1P11279 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LAMP1P11279 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LAMP1P11279 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
LAMP1P11279 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.27■□□□□ 0.2
LAMP1P11279 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.27■□□□□ 0.2
LAMP1P11279 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.27■□□□□ 0.2
LAMP1P11279 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LAMP1P11279 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.27■□□□□ 0.2
LAMP1P11279 AL020989.1-201ENST00000422979 469 ntBASIC16.27■□□□□ 0.2
LAMP1P11279 NUS1P1-201ENST00000446295 882 ntBASIC16.27■□□□□ 0.2
LAMP1P11279 SIGLEC30P-201ENST00000455569 941 ntBASIC16.27■□□□□ 0.2
LAMP1P11279 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.27■□□□□ 0.2
LAMP1P11279 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.27■□□□□ 0.2
LAMP1P11279 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.27■□□□□ 0.2
LAMP1P11279 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
LAMP1P11279 AC092329.2-201ENST00000598402 547 ntBASIC16.27■□□□□ 0.2
LAMP1P11279 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LAMP1P11279 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.27■□□□□ 0.2
LAMP1P11279 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LAMP1P11279 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.27■□□□□ 0.19
LAMP1P11279 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.27■□□□□ 0.19
LAMP1P11279 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LAMP1P11279 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LAMP1P11279 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
LAMP1P11279 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.27■□□□□ 0.19
LAMP1P11279 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LAMP1P11279 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
LAMP1P11279 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
LAMP1P11279 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.26■□□□□ 0.19
LAMP1P11279 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
LAMP1P11279 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 PCDHB17P-201ENST00000539533 2393 ntBASIC16.26■□□□□ 0.19
LAMP1P11279 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.26■□□□□ 0.19
LAMP1P11279 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.26■□□□□ 0.19
LAMP1P11279 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.26■□□□□ 0.19
LAMP1P11279 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.26■□□□□ 0.19
LAMP1P11279 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 SPDYE21P-201ENST00000413323 827 ntBASIC16.26■□□□□ 0.19
LAMP1P11279 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.26■□□□□ 0.19
LAMP1P11279 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.26■□□□□ 0.19
LAMP1P11279 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.26■□□□□ 0.19
LAMP1P11279 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LAMP1P11279 AC099336.1-202ENST00000602961 463 ntBASIC16.26■□□□□ 0.19
LAMP1P11279 AC069148.1-201ENST00000608741 768 ntBASIC16.26■□□□□ 0.19
LAMP1P11279 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 AC092119.3-201ENST00000612618 583 ntBASIC16.26■□□□□ 0.19
LAMP1P11279 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LAMP1P11279 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LAMP1P11279 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
LAMP1P11279 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms