Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 TSPY22P-201ENST00000427496 604 ntBASIC15.1■□□□□ 0.01
UBCP0CG48 RN7SL606P-201ENST00000472779 293 ntBASIC15.1■□□□□ 0.01
UBCP0CG48 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
UBCP0CG48 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.1■□□□□ 0.01
UBCP0CG48 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.1■□□□□ 0.01
UBCP0CG48 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 AC011840.4-201ENST00000578471 627 ntBASIC15.1■□□□□ 0.01
UBCP0CG48 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 STK25P1-201ENST00000585406 838 ntBASIC15.1■□□□□ 0.01
UBCP0CG48 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.1■□□□□ 0.01
UBCP0CG48 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
UBCP0CG48 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
UBCP0CG48 PCDHA1-201ENST00000378133 2726 ntBASIC15.1■□□□□ 0.01
UBCP0CG48 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.1■□□□□ 0.01
UBCP0CG48 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBCP0CG48 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.1■□□□□ 0.01
UBCP0CG48 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.09■□□□□ 0.01
UBCP0CG48 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
UBCP0CG48 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.09■□□□□ 0.01
UBCP0CG48 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.09■□□□□ 0.01
UBCP0CG48 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
UBCP0CG48 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
UBCP0CG48 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
UBCP0CG48 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UBCP0CG48 AL671277.2-201ENST00000458060 996 ntBASIC15.09■□□□□ 0.01
UBCP0CG48 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.09■□□□□ 0.01
UBCP0CG48 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.09■□□□□ 0.01
UBCP0CG48 AC124864.1-201ENST00000623408 392 ntBASIC15.09■□□□□ 0.01
UBCP0CG48 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UBCP0CG48 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.09■□□□□ 0.01
UBCP0CG48 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.09■□□□□ 0.01
UBCP0CG48 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
UBCP0CG48 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
UBCP0CG48 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.09■□□□□ 0.01
UBCP0CG48 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
UBCP0CG48 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UBCP0CG48 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
UBCP0CG48 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBCP0CG48 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UBCP0CG48 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UBCP0CG48 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.08■□□□□ 0.01
UBCP0CG48 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
UBCP0CG48 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
UBCP0CG48 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
UBCP0CG48 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UBCP0CG48 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.08■□□□□ 0
UBCP0CG48 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.08■□□□□ 0
UBCP0CG48 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.08■□□□□ 0
UBCP0CG48 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.08■□□□□ 0
UBCP0CG48 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 AC063952.2-201ENST00000498792 1227 ntBASIC15.08■□□□□ 0
UBCP0CG48 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.08■□□□□ 0
UBCP0CG48 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.08■□□□□ 0
UBCP0CG48 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
UBCP0CG48 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.08■□□□□ 0
UBCP0CG48 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.08■□□□□ 0
UBCP0CG48 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms