Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM1P09493 AC124947.2-201ENST00000547118 1133 ntBASIC18.97■□□□□ 0.63
TPM1P09493 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.97■□□□□ 0.63
TPM1P09493 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM1P09493 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM1P09493 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM1P09493 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM1P09493 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TPM1P09493 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM1P09493 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM1P09493 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TPM1P09493 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM1P09493 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TPM1P09493 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM1P09493 AC097374.2-201ENST00000618617 1306 ntBASIC18.97■□□□□ 0.63
TPM1P09493 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM1P09493 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TPM1P09493 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TPM1P09493 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TPM1P09493 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TPM1P09493 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM1P09493 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM1P09493 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TPM1P09493 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TPM1P09493 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TPM1P09493 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
TPM1P09493 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TPM1P09493 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.96■□□□□ 0.63
TPM1P09493 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TPM1P09493 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM1P09493 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.96■□□□□ 0.63
TPM1P09493 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.96■□□□□ 0.63
TPM1P09493 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM1P09493 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.96■□□□□ 0.63
TPM1P09493 GPR32P1-201ENST00000601788 811 ntBASIC18.96■□□□□ 0.63
TPM1P09493 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM1P09493 AL138966.2-201ENST00000621997 464 ntBASIC18.96■□□□□ 0.63
TPM1P09493 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM1P09493 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM1P09493 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM1P09493 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM1P09493 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
TPM1P09493 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM1P09493 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM1P09493 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM1P09493 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.95■□□□□ 0.62
TPM1P09493 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 AC103702.1-201ENST00000548801 2630 ntBASIC18.95■□□□□ 0.62
TPM1P09493 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM1P09493 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TPM1P09493 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 SLC25A1P3-201ENST00000395415 828 ntBASIC18.95■□□□□ 0.62
TPM1P09493 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM1P09493 LIN28AP1-201ENST00000429574 405 ntBASIC18.95■□□□□ 0.62
TPM1P09493 TSPY15P-201ENST00000457163 923 ntBASIC18.95■□□□□ 0.62
TPM1P09493 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.95■□□□□ 0.62
TPM1P09493 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM1P09493 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TPM1P09493 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM1P09493 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM1P09493 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TPM1P09493 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM1P09493 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms