Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CD48P09326 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CD48P09326 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.78■□□□□ 0.44
CD48P09326 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CD48P09326 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CD48P09326 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
CD48P09326 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.78■□□□□ 0.44
CD48P09326 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CD48P09326 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD48P09326 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD48P09326 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CD48P09326 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD48P09326 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.77■□□□□ 0.44
CD48P09326 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.77■□□□□ 0.44
CD48P09326 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD48P09326 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD48P09326 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD48P09326 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD48P09326 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD48P09326 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.77■□□□□ 0.44
CD48P09326 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD48P09326 KRT18P56-201ENST00000507275 550 ntBASIC17.77■□□□□ 0.44
CD48P09326 UNC93B7-201ENST00000509439 705 ntBASIC17.77■□□□□ 0.44
CD48P09326 AF238378.1-201ENST00000526806 358 ntBASIC17.77■□□□□ 0.44
CD48P09326 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.77■□□□□ 0.44
CD48P09326 DUX4L17-201ENST00000557360 1267 ntBASIC17.77■□□□□ 0.44
CD48P09326 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.77■□□□□ 0.44
CD48P09326 AL353135.1-201ENST00000606729 504 ntBASIC17.77■□□□□ 0.44
CD48P09326 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD48P09326 AL022326.1-202ENST00000641533 845 ntBASIC17.77■□□□□ 0.44
CD48P09326 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CD48P09326 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.77■□□□□ 0.44
CD48P09326 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD48P09326 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.77■□□□□ 0.44
CD48P09326 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.77■□□□□ 0.44
CD48P09326 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.77■□□□□ 0.43
CD48P09326 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CD48P09326 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.77■□□□□ 0.43
CD48P09326 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CD48P09326 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.77■□□□□ 0.43
CD48P09326 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CD48P09326 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD48P09326 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CD48P09326 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.76■□□□□ 0.43
CD48P09326 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 AL590787.1-201ENST00000568856 1315 ntBASIC17.76■□□□□ 0.43
CD48P09326 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.76■□□□□ 0.43
CD48P09326 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CD48P09326 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.76■□□□□ 0.43
CD48P09326 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CD48P09326 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
CD48P09326 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.76■□□□□ 0.43
CD48P09326 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.76■□□□□ 0.43
CD48P09326 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CD48P09326 AL139288.1-201ENST00000623748 933 ntBASIC17.76■□□□□ 0.43
CD48P09326 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.76■□□□□ 0.43
CD48P09326 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.76■□□□□ 0.43
CD48P09326 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CD48P09326 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.76■□□□□ 0.43
CD48P09326 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CD48P09326 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD48P09326 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms