Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
APOA4P06727 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
APOA4P06727 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
APOA4P06727 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.23■□□□□ 0.35
APOA4P06727 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.23■□□□□ 0.35
APOA4P06727 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.23■□□□□ 0.35
APOA4P06727 AC005915.1-201ENST00000624912 2018 ntBASIC17.23■□□□□ 0.35
APOA4P06727 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 KRT8P10-201ENST00000450021 1447 ntBASIC17.23■□□□□ 0.35
APOA4P06727 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.23■□□□□ 0.35
APOA4P06727 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
APOA4P06727 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.23■□□□□ 0.35
APOA4P06727 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.23■□□□□ 0.35
APOA4P06727 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.23■□□□□ 0.35
APOA4P06727 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.23■□□□□ 0.35
APOA4P06727 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.23■□□□□ 0.35
APOA4P06727 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.23■□□□□ 0.35
APOA4P06727 AC124947.2-201ENST00000547118 1133 ntBASIC17.23■□□□□ 0.35
APOA4P06727 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.23■□□□□ 0.35
APOA4P06727 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.23■□□□□ 0.35
APOA4P06727 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
APOA4P06727 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.23■□□□□ 0.35
APOA4P06727 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
APOA4P06727 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.23■□□□□ 0.35
APOA4P06727 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.23■□□□□ 0.35
APOA4P06727 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.23■□□□□ 0.35
APOA4P06727 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
APOA4P06727 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.23■□□□□ 0.35
APOA4P06727 AL353593.2-201ENST00000602529 1483 ntBASIC17.23■□□□□ 0.35
APOA4P06727 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.23■□□□□ 0.35
APOA4P06727 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APOA4P06727 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.22■□□□□ 0.35
APOA4P06727 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.22■□□□□ 0.35
APOA4P06727 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.22■□□□□ 0.35
APOA4P06727 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.22■□□□□ 0.35
APOA4P06727 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
APOA4P06727 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
APOA4P06727 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
APOA4P06727 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.22■□□□□ 0.35
APOA4P06727 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
APOA4P06727 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.22■□□□□ 0.35
APOA4P06727 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.22■□□□□ 0.35
APOA4P06727 KRT18P56-201ENST00000507275 550 ntBASIC17.22■□□□□ 0.35
APOA4P06727 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.22■□□□□ 0.35
APOA4P06727 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.22■□□□□ 0.35
APOA4P06727 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.22■□□□□ 0.35
APOA4P06727 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.22■□□□□ 0.35
APOA4P06727 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.22■□□□□ 0.35
APOA4P06727 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.22■□□□□ 0.35
APOA4P06727 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.22■□□□□ 0.35
APOA4P06727 PCDHA14-201ENST00000506751 2298 ntBASIC17.22■□□□□ 0.35
APOA4P06727 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOA4P06727 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.21■□□□□ 0.35
APOA4P06727 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.21■□□□□ 0.35
APOA4P06727 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
APOA4P06727 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
APOA4P06727 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.21■□□□□ 0.35
APOA4P06727 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOA4P06727 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
APOA4P06727 LINC01711-201ENST00000598340 967 ntBASIC17.21■□□□□ 0.35
APOA4P06727 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
APOA4P06727 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.21■□□□□ 0.35
APOA4P06727 AD001527.2-201ENST00000622994 785 ntBASIC17.21■□□□□ 0.35
APOA4P06727 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.21■□□□□ 0.35
APOA4P06727 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms