Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.66■□□□□ 0.1
P04436 AC023274.1-201ENST00000418278 595 ntBASIC15.66■□□□□ 0.1
P04436 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.66■□□□□ 0.1
P04436 DNAJB3-201ENST00000446806 729 ntBASIC15.66■□□□□ 0.1
P04436 PAWRP1-201ENST00000451083 565 ntBASIC15.66■□□□□ 0.1
P04436 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.66■□□□□ 0.1
P04436 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.66■□□□□ 0.1
P04436 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.66■□□□□ 0.1
P04436 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.66■□□□□ 0.1
P04436 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
P04436 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
P04436 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
P04436 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.66■□□□□ 0.1
P04436 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.66■□□□□ 0.1
P04436 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
P04436 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.65■□□□□ 0.1
P04436 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
P04436 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
P04436 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
P04436 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
P04436 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.65■□□□□ 0.1
P04436 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.65■□□□□ 0.1
P04436 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
P04436 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.65■□□□□ 0.1
P04436 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
P04436 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.65■□□□□ 0.1
P04436 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.65■□□□□ 0.1
P04436 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 KRT18P2-201ENST00000447938 1258 ntBASIC15.65■□□□□ 0.1
P04436 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
P04436 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.65■□□□□ 0.1
P04436 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.65■□□□□ 0.1
P04436 MIR3687-2-201ENST00000577708 61 ntBASIC15.65■□□□□ 0.1
P04436 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.65■□□□□ 0.1
P04436 MIR3687-1-201ENST00000614492 61 ntBASIC15.65■□□□□ 0.1
P04436 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.65■□□□□ 0.1
P04436 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.65■□□□□ 0.1
P04436 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
P04436 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.65■□□□□ 0.1
P04436 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04436 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
P04436 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 AC002310.6-201ENST00000624451 1377 ntBASIC15.64■□□□□ 0.09
P04436 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 NFIC-211ENST00000641145 8399 ntBASIC15.64■□□□□ 0.09
P04436 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
P04436 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
P04436 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
P04436 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.64■□□□□ 0.09
P04436 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.64■□□□□ 0.09
P04436 AC087163.2-201ENST00000457299 853 ntBASIC15.64■□□□□ 0.09
P04436 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.64■□□□□ 0.09
P04436 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
P04436 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 AC096734.2-201ENST00000562054 433 ntBASIC15.64■□□□□ 0.09
P04436 AC018845.2-201ENST00000568326 409 ntBASIC15.64■□□□□ 0.09
P04436 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
P04436 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.64■□□□□ 0.09
P04436 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.64■□□□□ 0.09
P04436 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.64■□□□□ 0.09
P04436 GPALPP1-207ENST00000611650 899 ntBASIC15.64■□□□□ 0.09
P04436 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
P04436 AC093525.9-201ENST00000624961 1746 ntBASIC15.64■□□□□ 0.09
P04436 AC007064.4-201ENST00000637740 555 ntBASIC15.64■□□□□ 0.09
P04436 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.64■□□□□ 0.09
P04436 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
P04436 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
P04436 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P04436 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
P04436 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.63■□□□□ 0.09
P04436 AL133373.2-201ENST00000623187 2828 ntBASIC15.63■□□□□ 0.09
P04436 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.63■□□□□ 0.09
P04436 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
P04436 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
P04436 EGFEM1P-202ENST00000431685 1563 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms