Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.71■□□□□ 0.75
MBD3O95983 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD3O95983 LINC00554-201ENST00000564841 3011 ntBASIC19.71■□□□□ 0.75
MBD3O95983 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD3O95983 GPR89P-201ENST00000407924 1495 ntBASIC19.71■□□□□ 0.75
MBD3O95983 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD3O95983 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD3O95983 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD3O95983 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
MBD3O95983 AL353692.3-201ENST00000407031 1396 ntBASIC19.7■□□□□ 0.74
MBD3O95983 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD3O95983 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MBD3O95983 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
MBD3O95983 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.7■□□□□ 0.74
MBD3O95983 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
MBD3O95983 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD3O95983 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.7■□□□□ 0.74
MBD3O95983 HLA-F-220ENST00000434407 884 ntBASIC19.7■□□□□ 0.74
MBD3O95983 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD3O95983 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.7■□□□□ 0.74
MBD3O95983 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.7■□□□□ 0.74
MBD3O95983 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 TUBB8P12-201ENST00000308911 1335 ntBASIC19.7■□□□□ 0.74
MBD3O95983 TUBB7P-202ENST00000428444 1305 ntBASIC19.7■□□□□ 0.74
MBD3O95983 TUBB8P7-204ENST00000567960 1332 ntBASIC19.7■□□□□ 0.74
MBD3O95983 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MBD3O95983 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MBD3O95983 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MBD3O95983 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD3O95983 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3O95983 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.69■□□□□ 0.74
MBD3O95983 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.69■□□□□ 0.74
MBD3O95983 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 ALOX12P2-203ENST00000570921 1945 ntBASIC19.69■□□□□ 0.74
MBD3O95983 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MBD3O95983 CYP2D8P-201ENST00000433633 1490 ntBASIC19.69■□□□□ 0.74
MBD3O95983 MST1L-201ENST00000442552 2185 ntBASIC19.69■□□□□ 0.74
MBD3O95983 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.69■□□□□ 0.74
MBD3O95983 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
MBD3O95983 TSPY7P-201ENST00000431358 1114 ntBASIC19.69■□□□□ 0.74
MBD3O95983 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.69■□□□□ 0.74
MBD3O95983 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.69■□□□□ 0.74
MBD3O95983 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.69■□□□□ 0.74
MBD3O95983 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.69■□□□□ 0.74
MBD3O95983 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.69■□□□□ 0.74
MBD3O95983 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.69■□□□□ 0.74
MBD3O95983 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.69■□□□□ 0.74
MBD3O95983 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.69■□□□□ 0.74
MBD3O95983 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.69■□□□□ 0.74
MBD3O95983 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MBD3O95983 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3O95983 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
MBD3O95983 AL513477.1-201ENST00000602865 2407 ntBASIC19.68■□□□□ 0.74
MBD3O95983 PAUPAR-201ENST00000630360 2965 ntBASIC19.68■□□□□ 0.74
MBD3O95983 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MBD3O95983 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
MBD3O95983 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MBD3O95983 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.68■□□□□ 0.74
MBD3O95983 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms