Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH8O95206 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH8O95206 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH8O95206 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDH8O95206 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDH8O95206 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDH8O95206 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH8O95206 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH8O95206 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDH8O95206 AC004967.1-201ENST00000453589 447 ntBASIC17.13■□□□□ 0.33
PCDH8O95206 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH8O95206 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH8O95206 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDH8O95206 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH8O95206 AC023141.13-201ENST00000604991 943 ntBASIC17.13■□□□□ 0.33
PCDH8O95206 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDH8O95206 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH8O95206 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH8O95206 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH8O95206 AC025580.3-201ENST00000617932 1424 ntBASIC17.13■□□□□ 0.33
PCDH8O95206 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH8O95206 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCDH8O95206 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDH8O95206 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH8O95206 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDH8O95206 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH8O95206 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCDH8O95206 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCDH8O95206 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PCDH8O95206 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH8O95206 AC211486.1-202ENST00000416371 468 ntBASIC17.12■□□□□ 0.33
PCDH8O95206 RHOQP3-201ENST00000437982 621 ntBASIC17.12■□□□□ 0.33
PCDH8O95206 PAWRP1-201ENST00000451083 565 ntBASIC17.12■□□□□ 0.33
PCDH8O95206 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDH8O95206 AC211476.1-201ENST00000503899 468 ntBASIC17.12■□□□□ 0.33
PCDH8O95206 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH8O95206 KRT19P2-202ENST00000557173 1012 ntBASIC17.12■□□□□ 0.33
PCDH8O95206 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDH8O95206 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH8O95206 AC134684.3-201ENST00000641758 218 ntBASIC17.12■□□□□ 0.33
PCDH8O95206 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
PCDH8O95206 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH8O95206 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH8O95206 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH8O95206 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDH8O95206 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH8O95206 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH8O95206 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDH8O95206 AC087163.2-201ENST00000457299 853 ntBASIC17.11■□□□□ 0.33
PCDH8O95206 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDH8O95206 PDPK2P-202ENST00000562415 1191 ntBASIC17.11■□□□□ 0.33
PCDH8O95206 AL078644.1-201ENST00000609881 752 ntBASIC17.11■□□□□ 0.33
PCDH8O95206 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDH8O95206 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDH8O95206 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDH8O95206 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDH8O95206 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH8O95206 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH8O95206 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH8O95206 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms