Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.9□□□□□ -0.02
CCNKO75909 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.9□□□□□ -0.02
CCNKO75909 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNKO75909 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNKO75909 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.9□□□□□ -0.02
CCNKO75909 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
CCNKO75909 MIR663A-201ENST00000385250 93 ntBASIC14.9□□□□□ -0.02
CCNKO75909 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNKO75909 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNKO75909 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.9□□□□□ -0.02
CCNKO75909 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.9□□□□□ -0.02
CCNKO75909 DUTP2-201ENST00000519164 463 ntBASIC14.9□□□□□ -0.02
CCNKO75909 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNKO75909 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.9□□□□□ -0.02
CCNKO75909 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.9□□□□□ -0.02
CCNKO75909 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.9□□□□□ -0.02
CCNKO75909 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNKO75909 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.9□□□□□ -0.02
CCNKO75909 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 AL121829.2-201ENST00000620908 328 ntBASIC14.9□□□□□ -0.02
CCNKO75909 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCNKO75909 AC073111.5-205ENST00000641717 521 ntBASIC14.9□□□□□ -0.02
CCNKO75909 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNKO75909 AC023908.3-201ENST00000564211 3047 ntBASIC14.9□□□□□ -0.02
CCNKO75909 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CCNKO75909 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNKO75909 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CCNKO75909 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNKO75909 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.9□□□□□ -0.02
CCNKO75909 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CCNKO75909 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.89□□□□□ -0.03
CCNKO75909 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.89□□□□□ -0.03
CCNKO75909 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCNKO75909 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CCNKO75909 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.89□□□□□ -0.03
CCNKO75909 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.89□□□□□ -0.03
CCNKO75909 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CCNKO75909 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.89□□□□□ -0.03
CCNKO75909 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCNKO75909 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCNKO75909 KRT8P41-201ENST00000533985 1514 ntBASIC14.89□□□□□ -0.03
CCNKO75909 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.89□□□□□ -0.03
CCNKO75909 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCNKO75909 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCNKO75909 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.89□□□□□ -0.03
CCNKO75909 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.89□□□□□ -0.03
CCNKO75909 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCNKO75909 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.89□□□□□ -0.03
CCNKO75909 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.89□□□□□ -0.03
CCNKO75909 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNKO75909 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.88□□□□□ -0.03
CCNKO75909 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCNKO75909 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CCNKO75909 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCNKO75909 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CCNKO75909 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.88□□□□□ -0.03
CCNKO75909 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CCNKO75909 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCNKO75909 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNKO75909 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCNKO75909 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.88□□□□□ -0.03
CCNKO75909 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCNKO75909 PNMA6B-201ENST00000538162 1200 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms