Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.85■□□□□ 0.45
LRCH4O75427 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
LRCH4O75427 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LRCH4O75427 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.84■□□□□ 0.45
LRCH4O75427 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.84■□□□□ 0.45
LRCH4O75427 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH4O75427 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH4O75427 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LRCH4O75427 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LRCH4O75427 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH4O75427 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LRCH4O75427 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.84■□□□□ 0.45
LRCH4O75427 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH4O75427 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH4O75427 LINC01711-201ENST00000598340 967 ntBASIC17.84■□□□□ 0.45
LRCH4O75427 AC025062.2-201ENST00000605477 670 ntBASIC17.84■□□□□ 0.45
LRCH4O75427 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.84■□□□□ 0.45
LRCH4O75427 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.84■□□□□ 0.45
LRCH4O75427 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH4O75427 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LRCH4O75427 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH4O75427 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
LRCH4O75427 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LRCH4O75427 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRCH4O75427 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRCH4O75427 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.83■□□□□ 0.45
LRCH4O75427 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.83■□□□□ 0.45
LRCH4O75427 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRCH4O75427 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRCH4O75427 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.83■□□□□ 0.45
LRCH4O75427 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRCH4O75427 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
LRCH4O75427 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
LRCH4O75427 AC243591.1-201ENST00000452967 1364 ntBASIC17.83■□□□□ 0.45
LRCH4O75427 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRCH4O75427 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.83■□□□□ 0.44
LRCH4O75427 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRCH4O75427 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRCH4O75427 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRCH4O75427 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.83■□□□□ 0.44
LRCH4O75427 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.83■□□□□ 0.44
LRCH4O75427 SCARNA2-201ENST00000458748 420 ntBASIC17.83■□□□□ 0.44
LRCH4O75427 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.83■□□□□ 0.44
LRCH4O75427 AC021087.4-201ENST00000563761 564 ntBASIC17.83■□□□□ 0.44
LRCH4O75427 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.83■□□□□ 0.44
LRCH4O75427 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRCH4O75427 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRCH4O75427 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.83■□□□□ 0.44
LRCH4O75427 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.83■□□□□ 0.44
LRCH4O75427 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
LRCH4O75427 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRCH4O75427 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRCH4O75427 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.82■□□□□ 0.44
LRCH4O75427 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.82■□□□□ 0.44
LRCH4O75427 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LRCH4O75427 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LRCH4O75427 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.82■□□□□ 0.44
LRCH4O75427 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRCH4O75427 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.82■□□□□ 0.44
LRCH4O75427 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.82■□□□□ 0.44
LRCH4O75427 DUSP5P1-201ENST00000441325 1139 ntBASIC17.82■□□□□ 0.44
LRCH4O75427 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.82■□□□□ 0.44
LRCH4O75427 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.82■□□□□ 0.44
LRCH4O75427 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.82■□□□□ 0.44
LRCH4O75427 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.82■□□□□ 0.44
LRCH4O75427 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.82■□□□□ 0.44
LRCH4O75427 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LRCH4O75427 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRCH4O75427 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.82■□□□□ 0.44
LRCH4O75427 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRCH4O75427 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms