Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TSPAN3O60637 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.68■□□□□ 0.42
TSPAN3O60637 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.68■□□□□ 0.42
TSPAN3O60637 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
TSPAN3O60637 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.68■□□□□ 0.42
TSPAN3O60637 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 MIR1233-2-201ENST00000408138 82 ntBASIC17.68■□□□□ 0.42
TSPAN3O60637 MIR1233-1-201ENST00000408722 82 ntBASIC17.68■□□□□ 0.42
TSPAN3O60637 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.68■□□□□ 0.42
TSPAN3O60637 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.68■□□□□ 0.42
TSPAN3O60637 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.68■□□□□ 0.42
TSPAN3O60637 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TSPAN3O60637 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.68■□□□□ 0.42
TSPAN3O60637 AC040169.1-201ENST00000565382 521 ntBASIC17.68■□□□□ 0.42
TSPAN3O60637 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.68■□□□□ 0.42
TSPAN3O60637 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.68■□□□□ 0.42
TSPAN3O60637 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.68■□□□□ 0.42
TSPAN3O60637 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.68■□□□□ 0.42
TSPAN3O60637 AC092865.6-201ENST00000642101 219 ntBASIC17.68■□□□□ 0.42
TSPAN3O60637 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TSPAN3O60637 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.68■□□□□ 0.42
TSPAN3O60637 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN3O60637 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TSPAN3O60637 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TSPAN3O60637 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TSPAN3O60637 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.67■□□□□ 0.42
TSPAN3O60637 AL138688.1-201ENST00000624851 1594 ntBASIC17.67■□□□□ 0.42
TSPAN3O60637 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.67■□□□□ 0.42
TSPAN3O60637 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.67■□□□□ 0.42
TSPAN3O60637 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.67■□□□□ 0.42
TSPAN3O60637 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TSPAN3O60637 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.67■□□□□ 0.42
TSPAN3O60637 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TSPAN3O60637 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.67■□□□□ 0.42
TSPAN3O60637 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.67■□□□□ 0.42
TSPAN3O60637 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.67■□□□□ 0.42
TSPAN3O60637 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.67■□□□□ 0.42
TSPAN3O60637 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TSPAN3O60637 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSPAN3O60637 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TSPAN3O60637 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.66■□□□□ 0.42
TSPAN3O60637 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.66■□□□□ 0.42
TSPAN3O60637 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.66■□□□□ 0.42
TSPAN3O60637 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TSPAN3O60637 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.66■□□□□ 0.42
TSPAN3O60637 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TSPAN3O60637 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.66■□□□□ 0.42
TSPAN3O60637 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 AC010327.4-202ENST00000591484 748 ntBASIC17.66■□□□□ 0.42
TSPAN3O60637 AL513190.1-201ENST00000621254 727 ntBASIC17.66■□□□□ 0.42
TSPAN3O60637 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.66■□□□□ 0.42
TSPAN3O60637 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.66■□□□□ 0.42
TSPAN3O60637 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TSPAN3O60637 LINC00896-202ENST00000609602 2128 ntBASIC17.66■□□□□ 0.42
TSPAN3O60637 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TSPAN3O60637 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TSPAN3O60637 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TSPAN3O60637 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TSPAN3O60637 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TSPAN3O60637 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
TSPAN3O60637 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 CROCCP2-202ENST00000412962 2773 ntBASIC17.65■□□□□ 0.42
TSPAN3O60637 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TSPAN3O60637 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TSPAN3O60637 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
TSPAN3O60637 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms